Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUX1O43812 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.25■□□□□ 0.51
DUX1O43812 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
DUX1O43812 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DUX1O43812 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.25■□□□□ 0.51
DUX1O43812 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
DUX1O43812 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.25■□□□□ 0.51
DUX1O43812 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
DUX1O43812 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.25■□□□□ 0.51
DUX1O43812 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DUX1O43812 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.25■□□□□ 0.51
DUX1O43812 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUX1O43812 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUX1O43812 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
DUX1O43812 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.25■□□□□ 0.51
DUX1O43812 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.25■□□□□ 0.51
DUX1O43812 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUX1O43812 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.25■□□□□ 0.51
DUX1O43812 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.25■□□□□ 0.51
DUX1O43812 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
DUX1O43812 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DUX1O43812 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
DUX1O43812 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DUX1O43812 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.24■□□□□ 0.51
DUX1O43812 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
DUX1O43812 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DUX1O43812 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.24■□□□□ 0.51
DUX1O43812 UPK3BP1-201ENST00000428678 509 ntBASIC18.24■□□□□ 0.51
DUX1O43812 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
DUX1O43812 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.24■□□□□ 0.51
DUX1O43812 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DUX1O43812 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.24■□□□□ 0.51
DUX1O43812 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DUX1O43812 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DUX1O43812 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DUX1O43812 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DUX1O43812 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.24■□□□□ 0.51
DUX1O43812 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.24■□□□□ 0.51
DUX1O43812 TREX1-205ENST00000625293 1783 ntBASIC18.24■□□□□ 0.51
DUX1O43812 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
DUX1O43812 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DUX1O43812 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DUX1O43812 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
DUX1O43812 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
DUX1O43812 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
DUX1O43812 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
DUX1O43812 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.23■□□□□ 0.51
DUX1O43812 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
DUX1O43812 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.23■□□□□ 0.51
DUX1O43812 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.23■□□□□ 0.51
DUX1O43812 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.23■□□□□ 0.51
DUX1O43812 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.23■□□□□ 0.51
DUX1O43812 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.23■□□□□ 0.51
DUX1O43812 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.23■□□□□ 0.51
DUX1O43812 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
DUX1O43812 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
DUX1O43812 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.22■□□□□ 0.51
DUX1O43812 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.22■□□□□ 0.51
DUX1O43812 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUX1O43812 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.22■□□□□ 0.51
DUX1O43812 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.22■□□□□ 0.51
DUX1O43812 GPAT2P1-201ENST00000444924 1672 ntBASIC18.22■□□□□ 0.51
DUX1O43812 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUX1O43812 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUX1O43812 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUX1O43812 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DUX1O43812 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
DUX1O43812 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.22■□□□□ 0.51
DUX1O43812 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUX1O43812 MCCD1P1-208ENST00000445732 328 ntBASIC18.22■□□□□ 0.51
DUX1O43812 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.22■□□□□ 0.51
DUX1O43812 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.22■□□□□ 0.51
DUX1O43812 GCSHP2-201ENST00000560971 527 ntBASIC18.22■□□□□ 0.51
DUX1O43812 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.22■□□□□ 0.51
DUX1O43812 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DUX1O43812 AP000550.4-202ENST00000639755 178 ntBASIC18.22■□□□□ 0.51
DUX1O43812 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
DUX1O43812 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUX1O43812 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.22■□□□□ 0.51
DUX1O43812 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.22■□□□□ 0.51
DUX1O43812 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUX1O43812 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUX1O43812 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUX1O43812 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms