Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SMAD6O43541 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.25■□□□□ 0.67
SMAD6O43541 ATP5G1P1-201ENST00000448724 379 ntBASIC19.25■□□□□ 0.67
SMAD6O43541 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.25■□□□□ 0.67
SMAD6O43541 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD6O43541 MIR4674-201ENST00000582457 87 ntBASIC19.25■□□□□ 0.67
SMAD6O43541 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD6O43541 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SMAD6O43541 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD6O43541 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SMAD6O43541 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD6O43541 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD6O43541 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SMAD6O43541 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SMAD6O43541 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD6O43541 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD6O43541 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD6O43541 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.24■□□□□ 0.67
SMAD6O43541 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.24■□□□□ 0.67
SMAD6O43541 AC005332.7-201ENST00000614046 2005 ntBASIC19.24■□□□□ 0.67
SMAD6O43541 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD6O43541 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD6O43541 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD6O43541 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SMAD6O43541 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD6O43541 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.24■□□□□ 0.67
SMAD6O43541 AC104076.2-201ENST00000448912 469 ntBASIC19.24■□□□□ 0.67
SMAD6O43541 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD6O43541 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
SMAD6O43541 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.24■□□□□ 0.67
SMAD6O43541 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.24■□□□□ 0.67
SMAD6O43541 AL138966.2-201ENST00000621997 464 ntBASIC19.24■□□□□ 0.67
SMAD6O43541 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SMAD6O43541 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.24■□□□□ 0.67
SMAD6O43541 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SMAD6O43541 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.24■□□□□ 0.67
SMAD6O43541 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD6O43541 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD6O43541 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.24■□□□□ 0.67
SMAD6O43541 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD6O43541 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
SMAD6O43541 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SMAD6O43541 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD6O43541 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SMAD6O43541 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD6O43541 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD6O43541 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD6O43541 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.23■□□□□ 0.67
SMAD6O43541 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
SMAD6O43541 FEM1AP3-201ENST00000403722 1741 ntBASIC19.23■□□□□ 0.67
SMAD6O43541 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SMAD6O43541 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.23■□□□□ 0.67
SMAD6O43541 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD6O43541 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD6O43541 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD6O43541 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD6O43541 MIR1224-201ENST00000408193 85 ntBASIC19.23■□□□□ 0.67
SMAD6O43541 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.23■□□□□ 0.67
SMAD6O43541 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SMAD6O43541 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SMAD6O43541 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD6O43541 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD6O43541 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD6O43541 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD6O43541 KRT8P45-201ENST00000414328 1447 ntBASIC19.23■□□□□ 0.67
SMAD6O43541 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.23■□□□□ 0.67
SMAD6O43541 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD6O43541 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD6O43541 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.22■□□□□ 0.67
SMAD6O43541 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.22■□□□□ 0.67
SMAD6O43541 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD6O43541 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SMAD6O43541 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SMAD6O43541 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD6O43541 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD6O43541 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD6O43541 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.22■□□□□ 0.67
SMAD6O43541 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.22■□□□□ 0.67
SMAD6O43541 AC010331.1-201ENST00000611423 582 ntBASIC19.22■□□□□ 0.67
SMAD6O43541 AC006011.2-201ENST00000621313 1158 ntBASIC19.22■□□□□ 0.67
SMAD6O43541 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.22■□□□□ 0.67
SMAD6O43541 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.22■□□□□ 0.67
SMAD6O43541 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.22■□□□□ 0.67
SMAD6O43541 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SMAD6O43541 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD6O43541 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.22■□□□□ 0.67
SMAD6O43541 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SMAD6O43541 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD6O43541 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.22■□□□□ 0.67
SMAD6O43541 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD6O43541 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.22■□□□□ 0.67
SMAD6O43541 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.22■□□□□ 0.67
SMAD6O43541 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD6O43541 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.22■□□□□ 0.67
SMAD6O43541 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.21■□□□□ 0.67
SMAD6O43541 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD6O43541 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.21■□□□□ 0.67
SMAD6O43541 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD6O43541 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD6O43541 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms