Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPTLC1O15269 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SPTLC1O15269 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.38■□□□□ 0.85
SPTLC1O15269 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SPTLC1O15269 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.38■□□□□ 0.85
SPTLC1O15269 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SPTLC1O15269 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SPTLC1O15269 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPTLC1O15269 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPTLC1O15269 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPTLC1O15269 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPTLC1O15269 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPTLC1O15269 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.37■□□□□ 0.85
SPTLC1O15269 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SPTLC1O15269 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.37■□□□□ 0.85
SPTLC1O15269 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.37■□□□□ 0.85
SPTLC1O15269 MIR4674-201ENST00000582457 87 ntBASIC20.37■□□□□ 0.85
SPTLC1O15269 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.37■□□□□ 0.85
SPTLC1O15269 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
SPTLC1O15269 AC006011.2-201ENST00000621313 1158 ntBASIC20.37■□□□□ 0.85
SPTLC1O15269 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPTLC1O15269 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPTLC1O15269 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPTLC1O15269 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
SPTLC1O15269 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPTLC1O15269 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPTLC1O15269 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.37■□□□□ 0.85
SPTLC1O15269 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPTLC1O15269 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SPTLC1O15269 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.36■□□□□ 0.85
SPTLC1O15269 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPTLC1O15269 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPTLC1O15269 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPTLC1O15269 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPTLC1O15269 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPTLC1O15269 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPTLC1O15269 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPTLC1O15269 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SPTLC1O15269 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPTLC1O15269 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPTLC1O15269 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPTLC1O15269 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.36■□□□□ 0.85
SPTLC1O15269 AC087388.1-201ENST00000571370 1112 ntBASIC20.36■□□□□ 0.85
SPTLC1O15269 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SPTLC1O15269 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPTLC1O15269 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPTLC1O15269 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPTLC1O15269 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.36■□□□□ 0.85
SPTLC1O15269 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SPTLC1O15269 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SPTLC1O15269 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SPTLC1O15269 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.35■□□□□ 0.85
SPTLC1O15269 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPTLC1O15269 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.35■□□□□ 0.85
SPTLC1O15269 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPTLC1O15269 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPTLC1O15269 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.35■□□□□ 0.85
SPTLC1O15269 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SPTLC1O15269 LIN28AP1-201ENST00000429574 405 ntBASIC20.35■□□□□ 0.85
SPTLC1O15269 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SPTLC1O15269 NTF6B-201ENST00000591913 560 ntBASIC20.35■□□□□ 0.85
SPTLC1O15269 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPTLC1O15269 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPTLC1O15269 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPTLC1O15269 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPTLC1O15269 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
SPTLC1O15269 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPTLC1O15269 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.35■□□□□ 0.85
SPTLC1O15269 AL032819.2-201ENST00000624543 2162 ntBASIC20.35■□□□□ 0.85
SPTLC1O15269 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SPTLC1O15269 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SPTLC1O15269 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPTLC1O15269 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.34■□□□□ 0.85
SPTLC1O15269 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTLC1O15269 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SPTLC1O15269 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SPTLC1O15269 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTLC1O15269 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.34■□□□□ 0.85
SPTLC1O15269 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.34■□□□□ 0.85
SPTLC1O15269 ATP5G1P1-201ENST00000448724 379 ntBASIC20.34■□□□□ 0.85
SPTLC1O15269 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.34■□□□□ 0.85
SPTLC1O15269 DUX4L26-201ENST00000489078 1255 ntBASIC20.34■□□□□ 0.85
SPTLC1O15269 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
SPTLC1O15269 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.34■□□□□ 0.85
SPTLC1O15269 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTLC1O15269 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.34■□□□□ 0.85
SPTLC1O15269 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.34■□□□□ 0.85
SPTLC1O15269 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTLC1O15269 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.34■□□□□ 0.85
SPTLC1O15269 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SPTLC1O15269 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTLC1O15269 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
SPTLC1O15269 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTLC1O15269 KRT8P45-201ENST00000414328 1447 ntBASIC20.34■□□□□ 0.85
SPTLC1O15269 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTLC1O15269 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTLC1O15269 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.34■□□□□ 0.85
SPTLC1O15269 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
SPTLC1O15269 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPTLC1O15269 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms