Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LAMA5O15230 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LAMA5O15230 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LAMA5O15230 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
LAMA5O15230 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.67■□□□□ 0.42
LAMA5O15230 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.67■□□□□ 0.42
LAMA5O15230 AC112497.1-201ENST00000624824 639 ntBASIC17.67■□□□□ 0.42
LAMA5O15230 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LAMA5O15230 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LAMA5O15230 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LAMA5O15230 AC098831.1-202ENST00000438821 336 ntBASIC17.67■□□□□ 0.42
LAMA5O15230 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LAMA5O15230 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LAMA5O15230 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LAMA5O15230 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LAMA5O15230 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LAMA5O15230 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LAMA5O15230 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.67■□□□□ 0.42
LAMA5O15230 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LAMA5O15230 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LAMA5O15230 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.66■□□□□ 0.42
LAMA5O15230 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.66■□□□□ 0.42
LAMA5O15230 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 AL157888.1-201ENST00000631930 593 ntBASIC17.66■□□□□ 0.42
LAMA5O15230 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.66■□□□□ 0.42
LAMA5O15230 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.66■□□□□ 0.42
LAMA5O15230 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.66■□□□□ 0.42
LAMA5O15230 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.66■□□□□ 0.42
LAMA5O15230 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LAMA5O15230 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.66■□□□□ 0.42
LAMA5O15230 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LAMA5O15230 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.66■□□□□ 0.42
LAMA5O15230 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.66■□□□□ 0.42
LAMA5O15230 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
LAMA5O15230 AC007225.1-201ENST00000566331 1836 ntBASIC17.66■□□□□ 0.42
LAMA5O15230 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LAMA5O15230 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.65■□□□□ 0.42
LAMA5O15230 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LAMA5O15230 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LAMA5O15230 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LAMA5O15230 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.65■□□□□ 0.42
LAMA5O15230 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LAMA5O15230 AL391807.1-203ENST00000604392 2365 ntBASIC17.65■□□□□ 0.42
LAMA5O15230 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LAMA5O15230 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
LAMA5O15230 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LAMA5O15230 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LAMA5O15230 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
LAMA5O15230 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.65■□□□□ 0.42
LAMA5O15230 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.65■□□□□ 0.42
LAMA5O15230 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.65■□□□□ 0.42
LAMA5O15230 AC010327.4-202ENST00000591484 748 ntBASIC17.65■□□□□ 0.42
LAMA5O15230 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LAMA5O15230 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LAMA5O15230 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LAMA5O15230 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LAMA5O15230 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.65■□□□□ 0.42
LAMA5O15230 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.65■□□□□ 0.42
LAMA5O15230 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.65■□□□□ 0.42
LAMA5O15230 AL691403.2-201ENST00000618460 490 ntBASIC17.65■□□□□ 0.42
LAMA5O15230 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
LAMA5O15230 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LAMA5O15230 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.64■□□□□ 0.41
LAMA5O15230 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LAMA5O15230 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LAMA5O15230 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LAMA5O15230 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LAMA5O15230 IGHV3-22-201ENST00000520721 359 ntBASIC17.64■□□□□ 0.41
LAMA5O15230 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.64■□□□□ 0.41
LAMA5O15230 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.64■□□□□ 0.41
LAMA5O15230 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LAMA5O15230 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LAMA5O15230 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LAMA5O15230 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
LAMA5O15230 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.63■□□□□ 0.41
LAMA5O15230 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.63■□□□□ 0.41
LAMA5O15230 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LAMA5O15230 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.63■□□□□ 0.41
LAMA5O15230 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.63■□□□□ 0.41
LAMA5O15230 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LAMA5O15230 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LAMA5O15230 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LAMA5O15230 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.63■□□□□ 0.41
LAMA5O15230 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LAMA5O15230 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms