Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 AIRN-201ENST00000601203 4374 ntBASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 LETM1P2-201ENST00000597330 2178 ntBASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 TSPY21P-201ENST00000433481 731 ntBASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TCRBV9S1A1TA0A576 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV9S1A1TA0A576 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 AC005332.8-201ENST00000622750 2735 ntBASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.16■□□□□ 0.66
TCRBV9S1A1TA0A576 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms