Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
U3KQE9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.92□□□□□ -1.78
U3KQE9 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC3.92□□□□□ -1.78
U3KQE9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
U3KQE9 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
U3KQE9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
U3KQE9 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
U3KQE9 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.91□□□□□ -1.78
U3KQE9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
U3KQE9 MIR323A-201ENST00000362199 86 ntBASIC3.91□□□□□ -1.78
U3KQE9 U3.2-201ENST00000362981 210 ntBASIC3.91□□□□□ -1.78
U3KQE9 RN7SKP160-201ENST00000363804 340 ntBASIC3.91□□□□□ -1.78
U3KQE9 RNU6-1141P-201ENST00000364520 107 ntBASIC3.91□□□□□ -1.78
U3KQE9 Y_RNA.273-201ENST00000364703 102 ntBASIC3.91□□□□□ -1.78
U3KQE9 SNORA72.2-201ENST00000365028 127 ntBASIC3.91□□□□□ -1.78
U3KQE9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC3.91□□□□□ -1.78
U3KQE9 MIR600-201ENST00000385007 98 ntBASIC3.91□□□□□ -1.78
U3KQE9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.91□□□□□ -1.78
U3KQE9 AL355433.1-201ENST00000422804 300 ntBASIC3.91□□□□□ -1.78
U3KQE9 AC092047.1-201ENST00000424997 240 ntBASIC3.91□□□□□ -1.78
U3KQE9 AL512844.2-201ENST00000433990 593 ntBASIC3.91□□□□□ -1.78
U3KQE9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.91□□□□□ -1.78
U3KQE9 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.91□□□□□ -1.78
U3KQE9 H2AFZP5-201ENST00000446960 382 ntBASIC3.91□□□□□ -1.78
U3KQE9 RPS27AP9-201ENST00000477681 438 ntBASIC3.91□□□□□ -1.78
U3KQE9 RPS21P4-201ENST00000487122 248 ntBASIC3.91□□□□□ -1.78
U3KQE9 SNORA31.8-201ENST00000516327 108 ntBASIC3.91□□□□□ -1.78
U3KQE9 SNORA70.16-201ENST00000516390 95 ntBASIC3.91□□□□□ -1.78
U3KQE9 IGKV3D-34-201ENST00000522638 302 ntBASIC3.91□□□□□ -1.78
U3KQE9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.91□□□□□ -1.78
U3KQE9 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC3.91□□□□□ -1.78
U3KQE9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.91□□□□□ -1.78
U3KQE9 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.91□□□□□ -1.78
U3KQE9 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.91□□□□□ -1.78
U3KQE9 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.91□□□□□ -1.78
U3KQE9 AC109309.2-201ENST00000612597 332 ntBASIC3.91□□□□□ -1.78
U3KQE9 AC048347.1-201ENST00000624621 427 ntBASIC3.91□□□□□ -1.78
U3KQE9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.91□□□□□ -1.78
U3KQE9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
U3KQE9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
U3KQE9 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
U3KQE9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
U3KQE9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
U3KQE9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
U3KQE9 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
U3KQE9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
U3KQE9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
U3KQE9 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
U3KQE9 MARK2P15-201ENST00000432204 2186 ntBASIC3.9□□□□□ -1.78
U3KQE9 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.9□□□□□ -1.78
U3KQE9 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
U3KQE9 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
U3KQE9 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
U3KQE9 AC092268.1-201ENST00000342691 405 ntBASIC3.9□□□□□ -1.79
U3KQE9 RN7SKP113-201ENST00000363891 295 ntBASIC3.9□□□□□ -1.79
U3KQE9 Y_RNA.238-201ENST00000364441 102 ntBASIC3.9□□□□□ -1.79
U3KQE9 RNU4-17P-201ENST00000365598 141 ntBASIC3.9□□□□□ -1.79
U3KQE9 SNORA2.3-201ENST00000383920 135 ntBASIC3.9□□□□□ -1.79
U3KQE9 AC078809.1-201ENST00000427601 140 ntBASIC3.9□□□□□ -1.79
U3KQE9 RPL35AP21-201ENST00000437667 333 ntBASIC3.9□□□□□ -1.79
U3KQE9 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC3.9□□□□□ -1.79
U3KQE9 RPL37P4-201ENST00000448908 268 ntBASIC3.9□□□□□ -1.79
U3KQE9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.9□□□□□ -1.79
U3KQE9 snoU13.4-201ENST00000458916 104 ntBASIC3.9□□□□□ -1.79
U3KQE9 RN7SL443P-201ENST00000464331 290 ntBASIC3.9□□□□□ -1.79
U3KQE9 RPL23AP14-201ENST00000468281 468 ntBASIC3.9□□□□□ -1.79
U3KQE9 AC010409.1-201ENST00000487382 476 ntBASIC3.9□□□□□ -1.79
U3KQE9 AC091874.1-201ENST00000511402 339 ntBASIC3.9□□□□□ -1.79
U3KQE9 RNU6-191P-201ENST00000516295 94 ntBASIC3.9□□□□□ -1.79
U3KQE9 RPL23AP53-201ENST00000521854 457 ntBASIC3.9□□□□□ -1.79
U3KQE9 IGKV2-18-201ENST00000522607 343 ntBASIC3.9□□□□□ -1.79
U3KQE9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.9□□□□□ -1.79
U3KQE9 CR383656.8-201ENST00000549046 145 ntBASIC3.9□□□□□ -1.79
U3KQE9 AC021231.3-201ENST00000558497 370 ntBASIC3.9□□□□□ -1.79
U3KQE9 UBL5P4-201ENST00000562584 236 ntBASIC3.9□□□□□ -1.79
U3KQE9 SNRPGP15-201ENST00000600149 222 ntBASIC3.9□□□□□ -1.79
U3KQE9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.9□□□□□ -1.79
U3KQE9 AC019159.1-201ENST00000605094 187 ntBASIC3.9□□□□□ -1.79
U3KQE9 AC010999.1-201ENST00000611856 324 ntBASIC3.9□□□□□ -1.79
U3KQE9 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.9□□□□□ -1.79
U3KQE9 AC008079.2-201ENST00000623543 20396 ntBASIC3.9□□□□□ -1.79
U3KQE9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
U3KQE9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
U3KQE9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.79
U3KQE9 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
U3KQE9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.9□□□□□ -1.79
U3KQE9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
U3KQE9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.89□□□□□ -1.79
U3KQE9 AC135776.4-201ENST00000624300 1904 ntBASIC3.89□□□□□ -1.79
U3KQE9 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
U3KQE9 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
U3KQE9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
U3KQE9 SRP72P2-201ENST00000344851 1979 ntBASIC3.89□□□□□ -1.79
U3KQE9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.89□□□□□ -1.79
U3KQE9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
U3KQE9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
U3KQE9 RNU6-1272P-201ENST00000362776 107 ntBASIC3.89□□□□□ -1.79
U3KQE9 Z98749.2-208ENST00000381646 500 ntBASIC3.89□□□□□ -1.79
U3KQE9 RNU6-1310P-201ENST00000384153 107 ntBASIC3.89□□□□□ -1.79
U3KQE9 AL133270.1-201ENST00000402635 279 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms