Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MTCO1P18-201ENST00000455518 1419 ntBASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 RNU6-611P-201ENST00000384276 104 ntBASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 CCNG1P1-201ENST00000406783 885 ntBASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 RNU6-733P-201ENST00000410759 104 ntBASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AC011005.2-201ENST00000487324 359 ntBASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 MTCO2P15-201ENST00000532655 656 ntBASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 CCNG2P1-201ENST00000549521 1000 ntBASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 WISP1-OT1-201ENST00000602893 642 ntBASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AL035411.2-201ENST00000604022 421 ntBASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AP000860.1-201ENST00000605250 559 ntBASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AC112220.3-201ENST00000605502 502 ntBASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 BX284668.6-201ENST00000606899 438 ntBASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AC135507.2-201ENST00000612443 309 ntBASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 AC091834.1-201ENST00000614543 472 ntBASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 DDX43P2-201ENST00000604753 1354 ntBASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.41□□□□□ -2.34
LINC01558Q9Y6Z2 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.4□□□□□ -2.34
LINC01558Q9Y6Z2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.34
LINC01558Q9Y6Z2 SNORA25-201ENST00000384384 134 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 MIR585-201ENST00000384887 94 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 MIR525-201ENST00000384978 85 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 EIF1P1-201ENST00000421436 341 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AL035407.1-201ENST00000429211 571 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 HSPE1P13-201ENST00000451143 297 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 RPL32P14-201ENST00000463196 378 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AC084024.2-201ENST00000503480 791 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AC108078.1-201ENST00000508073 725 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AC017037.2-201ENST00000513850 890 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 RNU6-586P-201ENST00000517265 104 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AC109329.1-201ENST00000518744 317 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AC008088.1-201ENST00000580993 280 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AC021171.1-201ENST00000603137 706 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AL022345.2-201ENST00000606307 135 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AL021707.7-201ENST00000607991 416 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 AC079416.3-201ENST00000624479 549 ntBASIC0.4□□□□□ -2.35
LINC01558Q9Y6Z2 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 RNU5E-8P-201ENST00000363502 116 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 RNU6-7-201ENST00000364784 107 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 RNU6-8-201ENST00000365467 107 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 AC004965.1-201ENST00000413033 213 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 SRIP3-201ENST00000413200 219 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 AC019178.2-201ENST00000423595 505 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 MTCO3P5-201ENST00000433620 714 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 JTBP1-201ENST00000441314 247 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 AL353705.4-201ENST00000449661 238 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 RPL23AP35-201ENST00000451906 501 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 FTH1P2-201ENST00000466086 412 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 AC093852.1-201ENST00000503587 266 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 RNU6-416P-201ENST00000516265 103 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 AC136628.3-201ENST00000521868 290 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 BPTFP1-201ENST00000579209 492 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 CLIC4P2-201ENST00000601934 717 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 AC068724.3-201ENST00000625906 87 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 GMFB-210ENST00000628554 639 ntTSL 4 BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 MIR6866-201ENST00000638146 69 ntBASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
LINC01558Q9Y6Z2 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.38□□□□□ -2.35
LINC01558Q9Y6Z2 AC104454.1-201ENST00000421341 1401 ntBASIC0.38□□□□□ -2.35
LINC01558Q9Y6Z2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms