Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AP004607.1-201ENST00000524456 203 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 RN7SL290P-201ENST00000578661 300 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 AC108081.1-201ENST00000604358 221 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 AL356157.2-201ENST00000605122 111 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 AP002826.1-201ENST00000608835 315 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 uc_338.7-201ENST00000621834 124 ntBASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB3Q9Y5E6 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 Y_RNA.179-201ENST00000363844 90 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 Y_RNA.251-201ENST00000364551 99 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 Y_RNA.293-201ENST00000364908 93 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 MIR616-201ENST00000385293 97 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 RNU1-77P-201ENST00000390868 162 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 AL645927.1-201ENST00000396783 406 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 AL133270.1-201ENST00000402635 279 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 RN7SKP213-201ENST00000410746 298 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 RNU2-68P-201ENST00000410878 191 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 RPL23AP27-201ENST00000415161 451 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 AIMP1P2-201ENST00000425294 312 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 AL135790.2-201ENST00000437701 267 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 GPM6BP3-201ENST00000442797 145 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 RN7SL727P-201ENST00000482164 296 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 RNU6-772P-201ENST00000516042 105 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 AC136628.3-201ENST00000521868 290 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 SNORD84-203ENST00000584275 78 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 AC024581.2-201ENST00000619986 252 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 U6.95-201ENST00000636931 70 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 AC074101.1-201ENST00000637861 241 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 AC100757.1-201ENST00000616872 1835 ntBASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB3Q9Y5E6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 DEFB108F-201ENST00000344638 222 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 Y_RNA.24-201ENST00000362508 103 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 RNU6-173P-201ENST00000364215 104 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 SNORA48.4-201ENST00000391089 134 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 RNU6-588P-201ENST00000410281 105 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 RPL26P27-201ENST00000414397 437 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 CYP4F29P-201ENST00000420685 446 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 RPL7AP49-201ENST00000429522 581 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 AL591438.1-201ENST00000433508 581 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 snoU13.6-201ENST00000458785 104 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 AC011276.1-201ENST00000469688 323 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 AC093270.2-201ENST00000486157 792 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 AL132838.2-201ENST00000492041 314 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 AC072052.1-201ENST00000496556 306 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 RNU6-436P-201ENST00000516171 114 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 TRAV28-201ENST00000557548 323 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 MIR4700-201ENST00000578311 74 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 AC000068.2-201ENST00000608816 460 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 AC068647.2-201ENST00000637380 353 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 U6.99-201ENST00000637524 83 ntBASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHB3Q9Y5E6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 Y_RNA.294-201ENST00000364916 102 ntBASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 SNORA36A-201ENST00000384221 132 ntBASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PCDHB3Q9Y5E6 AL512633.1-201ENST00000399931 655 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms