Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TPTEP1-208ENST00000636884 213 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 DEFB108F-201ENST00000344638 222 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 U3.12-201ENST00000364498 214 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-116P-201ENST00000384042 109 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-190P-201ENST00000384154 102 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 U3.39-201ENST00000408569 239 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 RPS20P15-201ENST00000412792 311 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 TOMM22P1-201ENST00000418578 312 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 HSPE1P1-201ENST00000421494 318 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 MTND1P14-201ENST00000427400 950 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 RPL7L1P10-201ENST00000427790 463 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 HMGB1P27-201ENST00000431429 603 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 MRPL50P4-201ENST00000446432 475 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-1208P-201ENST00000459588 107 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 RPS29P2-201ENST00000479278 136 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 HMGB1P22-201ENST00000505315 124 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AC103851.1-201ENST00000506833 274 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 FCF1P8-201ENST00000510322 597 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 TTC39CP1-201ENST00000512513 755 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 SNORA31.3-201ENST00000516029 96 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 Y_RNA.689-201ENST00000516589 107 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AL355836.1-201ENST00000555951 870 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 MIR4795-201ENST00000584182 89 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AC005498.1-201ENST00000592125 465 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AL158032.1-201ENST00000605401 106 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AC021646.1-201ENST00000605469 484 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AC007619.2-201ENST00000605743 379 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AC092807.2-201ENST00000609367 243 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 U4.6-201ENST00000621618 127 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AL360181.4-201ENST00000621752 134 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 RMST_7.1-201ENST00000621935 268 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 AP001350.1-201ENST00000601906 1524 ntBASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.73□□□□□ -1.81
SSX2IPQ9Y2D8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 AC121333.1-201ENST00000567488 2709 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-600P-201ENST00000362524 99 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 RNU5A-1-201ENST00000362698 116 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 Y_RNA.378-201ENST00000365652 113 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-831P-201ENST00000384548 107 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-1011P-201ENST00000384668 107 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 RN7SKP140-201ENST00000411196 284 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 DBIP2-201ENST00000419076 262 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 USP9YP20-201ENST00000419224 558 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 RPS15AP6-201ENST00000420703 385 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 AL451054.2-201ENST00000420896 202 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 RN7SL594P-201ENST00000470590 287 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 AC108860.1-201ENST00000484521 383 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 AC093663.1-201ENST00000497190 394 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 CCDC34P1-201ENST00000507441 517 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 AC106782.4-201ENST00000568264 210 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 MTND5P42-201ENST00000637720 498 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 AC007496.3-201ENST00000624987 3443 ntBASIC3.72□□□□□ -1.81
SSX2IPQ9Y2D8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SSX2IPQ9Y2D8 Z83843.1-201ENST00000604070 3685 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 AL356274.2-201ENST00000624379 3752 ntBASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSX2IPQ9Y2D8 RNU6-1013P-201ENST00000384180 107 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms