Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AL137003.2-201ENST00000606924 2538 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 RNU6-884P-201ENST00000363889 107 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 RNU6-701P-201ENST00000384059 107 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 RNU6-1072P-201ENST00000384703 107 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 RNU6-443P-201ENST00000384780 107 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 RNU2-36P-201ENST00000410361 191 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AC007064.1-201ENST00000412238 351 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 BTF3L4P3-201ENST00000418879 476 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 SEPT2P1-201ENST00000419651 180 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AC006366.1-201ENST00000422002 759 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 RAC1P6-201ENST00000423911 575 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AL356583.2-201ENST00000426536 280 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 GTF2IP20-201ENST00000431663 360 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 HMGB3P12-201ENST00000438745 556 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 COX6CP12-201ENST00000446748 202 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 USP9YP12-201ENST00000450481 570 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 SSXP1-201ENST00000453640 473 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 MRPS17P3-201ENST00000465453 385 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 COX6CP5-201ENST00000527162 228 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 GLYCAM1-201ENST00000546596 285 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 HMGN2P15-201ENST00000585707 270 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AL670379.6-201ENST00000603753 252 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AL670379.11-201ENST00000604059 253 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AC008162.1-201ENST00000604718 254 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AL670379.1-201ENST00000604752 252 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AL670379.5-201ENST00000605253 252 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AL670379.12-201ENST00000605291 253 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AL670379.8-201ENST00000605353 252 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AC004805.2-201ENST00000605382 482 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AL670379.7-201ENST00000605823 252 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 RNU6-87P-201ENST00000607561 108 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AC107294.1-201ENST00000609524 467 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AC006338.1-201ENST00000618453 749 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 AC019226.2-201ENST00000625973 424 ntBASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAPPC4Q9Y296 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 RNU4-21P-201ENST00000362802 126 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 RNU5F-7P-201ENST00000363696 115 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 RNU5E-6P-201ENST00000365574 115 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 RNU6-817P-201ENST00000391083 104 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 FCF1P10-201ENST00000407590 479 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 UBE2D3P4-201ENST00000441973 436 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 TAF9P1-201ENST00000445421 515 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 CECR9-201ENST00000453421 199 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 TAF9P2-201ENST00000454958 515 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 SUMO2P6-201ENST00000505273 288 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AC026407.1-201ENST00000518369 204 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AC022634.1-201ENST00000520765 532 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 SUB1P1-201ENST00000524415 382 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AP003122.3-201ENST00000526316 255 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AP003181.2-201ENST00000528941 181 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AC109446.2-201ENST00000567872 497 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 MIR3117-201ENST00000584034 78 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 MIR4658-201ENST00000584344 65 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AC007363.1-201ENST00000604736 620 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AL451064.1-201ENST00000607718 471 ntBASIC2.1□□□□□ -2.07
TRAPPC4Q9Y296 AC046143.2-201ENST00000609789 160 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms