Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 AC009063.1-201ENST00000563342 702 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 AC103810.1-201ENST00000579873 453 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 BNIP3P9-201ENST00000603714 553 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 AL031775.1-201ENST00000607014 887 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 AC138749.5-201ENST00000611461 208 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 AC116165.2-201ENST00000616705 206 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 AC092140.2-201ENST00000618027 521 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 AC009878.1-201ENST00000621819 340 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 AP000770.2-201ENST00000623694 100 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 MIR3199-2-201ENST00000636243 86 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 SNORA68.1-201ENST00000364537 132 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 SNORA70B-201ENST00000384210 135 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 RNA5SP181-201ENST00000410246 98 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 RNU4-72P-201ENST00000410754 173 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 RNU2-25P-201ENST00000411041 191 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AL135786.1-201ENST00000415892 214 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AL353729.1-201ENST00000425044 720 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AC137499.1-201ENST00000427602 88 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AC098826.1-201ENST00000433943 471 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 HMGB3P12-201ENST00000438745 556 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 EPS15P1-201ENST00000448836 336 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AL133217.1-201ENST00000450980 425 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 MTATP6P7-201ENST00000453315 681 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 RNU1-41P-201ENST00000516161 162 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 RNU1-48P-201ENST00000516400 162 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 RNA5SP281-201ENST00000516504 135 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AC106038.2-201ENST00000520706 568 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AC060766.3-201ENST00000591442 263 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 WISP1-OT1-201ENST00000602893 642 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AC174048.1-201ENST00000603389 144 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AL022161.1-201ENST00000604390 213 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 Z99289.3-201ENST00000605586 594 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AC092354.1-201ENST00000606057 376 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AL365204.3-201ENST00000612448 685 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 AF246928.1-201ENST00000623768 87 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 ZNF271P-202ENST00000465539 1970 ntBASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.1□□□□□ -2.07
CLCF1Q9UBD9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 RNU6-288P-201ENST00000363690 104 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 RNU6-960P-201ENST00000364056 120 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 RN7SKP226-201ENST00000364912 300 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 SMIM11P1-201ENST00000369586 178 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 RN7SKP192-201ENST00000411291 327 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 RPS12P24-201ENST00000412619 387 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 Z98742.3-201ENST00000418637 326 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AL356320.1-201ENST00000429616 163 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AC119618.1-201ENST00000434191 222 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 UBE2D3P4-201ENST00000441973 436 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 OSTCP8-201ENST00000445117 448 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 KATNBL1P6-201ENST00000453433 915 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AC073901.1-201ENST00000462471 408 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 MTCO2P29-201ENST00000465212 189 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 RPL23AP70-201ENST00000483361 460 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 MTND1P3-201ENST00000484956 952 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 ANXA2P1-201ENST00000505539 926 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 RPL37P25-201ENST00000507308 276 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 RNU6-677P-201ENST00000516914 101 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 RNU6-703P-201ENST00000516946 107 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AC022878.1-201ENST00000530684 149 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AC007151.1-201ENST00000572774 483 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 MIR5007-201ENST00000583098 95 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AC112191.3-201ENST00000604371 277 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AC116312.1-201ENST00000606841 314 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AC012360.2-201ENST00000609349 391 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms