Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC008739.3-201ENST00000603262 127 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 AL670379.10-201ENST00000604330 253 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 AL670379.9-201ENST00000605428 253 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 MIR6867-201ENST00000610636 67 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 AC010378.1-201ENST00000619270 362 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 U6.99-201ENST00000637524 83 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 AL158163.1-201ENST00000603915 1649 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 AF127577.6-201ENST00000623352 2191 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 RNU6-1011P-201ENST00000384668 107 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 AP000567.1-201ENST00000406413 156 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 MIR1251-201ENST00000408552 70 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 RNU6-293P-201ENST00000411259 106 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 AL356095.1-201ENST00000417217 199 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 MTCO2P27-201ENST00000420740 428 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 RPL7P37-201ENST00000425095 738 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 SAR1AP4-201ENST00000429225 591 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 AC007389.2-201ENST00000434630 306 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 FABP5P14-201ENST00000437273 393 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 RPL23AP46-201ENST00000438548 490 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 HMGB3P8-201ENST00000449709 577 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 MTATP6P7-201ENST00000453315 681 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 SNORD19B-201ENST00000459623 84 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 SNRPGP3-201ENST00000469405 227 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 RPL30P14-201ENST00000482744 348 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 HMGN1P11-201ENST00000508668 303 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 AP005597.4-201ENST00000526762 229 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 H3F3AP1-201ENST00000559984 334 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 MIR3609-201ENST00000582661 80 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 AP000787.2-201ENST00000604432 568 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 AC012531.5-201ENST00000611375 151 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 AC135507.2-201ENST00000612443 309 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 AC073308.1-201ENST00000623696 305 ntBASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCM2LQ9NUG4 Z82217.1-201ENST00000625157 8149 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 FRG1CP-201ENST00000358464 769 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 Y_RNA.315-201ENST00000365117 102 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 AL391417.1-201ENST00000404100 426 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 Z98941.1-201ENST00000407764 100 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 RNU6ATAC-201ENST00000408749 126 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 AL358472.1-201ENST00000431295 329 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 GOT2P5-201ENST00000433995 546 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 RPS29P7-201ENST00000439662 171 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 AC006011.1-201ENST00000442758 349 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 PPIAP15-201ENST00000479662 484 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 RNU6-703P-201ENST00000516946 107 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 HPRT1P3-201ENST00000539521 576 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 FRG2DP-202ENST00000566967 323 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 AC044792.1-201ENST00000593294 196 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 AC126177.8-201ENST00000618339 1015 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 U2.21-201ENST00000637295 81 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 AL353746.1-201ENST00000566293 6881 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 SRP72P2-201ENST00000344851 1979 ntBASIC3.78□□□□□ -1.8
CCM2LQ9NUG4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.77□□□□□ -1.81
CCM2LQ9NUG4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.77□□□□□ -1.81
CCM2LQ9NUG4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCM2LQ9NUG4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
CCM2LQ9NUG4 SNORD35B-201ENST00000363660 87 ntBASIC3.77□□□□□ -1.81
CCM2LQ9NUG4 RNU6-1329P-201ENST00000365664 107 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms