Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 NDUFA5P10-201ENST00000432147 357 ntBASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 FABP5P14-201ENST00000437273 393 ntBASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 MTND4P6-201ENST00000438297 472 ntBASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 AC006390.1-201ENST00000508068 283 ntBASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 AC008837.2-201ENST00000513076 418 ntBASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 SNORA48.9-201ENST00000516419 162 ntBASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 NDUFA5P6-201ENST00000542110 379 ntBASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 RN7SL622P-201ENST00000585292 275 ntBASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 AC098848.2-201ENST00000588023 330 ntBASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 AC007349.4-201ENST00000608114 532 ntBASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 MIR6798-201ENST00000612887 67 ntBASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 AL359314.1-201ENST00000616913 261 ntBASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 AC073968.1-201ENST00000618594 637 ntBASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 MIR8065-201ENST00000620577 100 ntBASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 SNORA25-201ENST00000384384 134 ntBASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 MTND4LP20-201ENST00000402379 270 ntBASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 RPS26P5-201ENST00000418544 335 ntBASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 AC233981.1-201ENST00000423224 461 ntBASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 AC108667.1-201ENST00000428618 249 ntBASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 TRBVA-201ENST00000498804 316 ntBASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 RNU4-57P-201ENST00000515980 135 ntBASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 CYP4A27P-201ENST00000567218 190 ntBASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 AL391813.1-201ENST00000603098 260 ntBASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 AC055876.5-201ENST00000605667 259 ntBASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 OR4G3P-201ENST00000633500 913 ntBASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 AC009950.2-201ENST00000636548 183 ntBASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 AC241585.2-209ENST00000638217 143 ntBASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 MTND5P11-201ENST00000511037 1812 ntBASIC0.27□□□□□ -2.37
SMCO4Q9NRQ5 SNORD115-3-201ENST00000363100 82 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 SNORD114-27-201ENST00000363766 70 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 Y_RNA.327-201ENST00000365201 102 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 RNU6-452P-201ENST00000384406 107 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 MIR561-201ENST00000385216 97 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 RNU11-3P-201ENST00000391111 133 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 HMGN1P14-201ENST00000412459 517 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 AL590383.1-201ENST00000428602 75 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 AL592447.1-201ENST00000447592 540 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 DUXAP8-207ENST00000456786 622 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 RNU6-1095P-201ENST00000516148 108 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 DEFB108E-201ENST00000524692 240 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 OR5AK1P-201ENST00000524837 922 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 AP000907.2-201ENST00000530827 353 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 VN1R80P-201ENST00000597126 338 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 AC010615.3-201ENST00000597319 394 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 AL713866.2-201ENST00000603579 219 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 AL354950.1-201ENST00000614150 568 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 MIR8063-201ENST00000621930 81 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 DDX43P2-201ENST00000604753 1354 ntBASIC0.26□□□□□ -2.37
SMCO4Q9NRQ5 NACAP2-201ENST00000318548 624 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 SNORD33-201ENST00000362761 85 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 RNU1-23P-201ENST00000363361 144 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 SNORA50A-201ENST00000384225 134 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 RNU1-57P-201ENST00000384491 166 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 RNA5SP100-201ENST00000410903 110 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 RNA5SP59-201ENST00000410922 110 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 CBX3P6-201ENST00000430257 527 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 MED14P1-201ENST00000430517 648 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 COX6CP6-201ENST00000490840 228 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 EIF5A2P1-201ENST00000564027 460 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 AC005786.1-201ENST00000588553 154 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 AC009541.1-201ENST00000438279 2662 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 AC134026.1-201ENST00000623249 2239 ntBASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
SMCO4Q9NRQ5 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.24□□□□□ -2.37
SMCO4Q9NRQ5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SMCO4Q9NRQ5 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
SMCO4Q9NRQ5 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.24□□□□□ -2.37
SMCO4Q9NRQ5 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.24□□□□□ -2.37
SMCO4Q9NRQ5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.24□□□□□ -2.37
SMCO4Q9NRQ5 AC018868.1-201ENST00000491307 315 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms