Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 RNU6-266P-201ENST00000364225 107 ntBASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 RNA5SP235-201ENST00000365411 114 ntBASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 MIR607-201ENST00000385241 96 ntBASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 FTH1P6-201ENST00000430768 320 ntBASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 AL591212.2-201ENST00000433923 257 ntBASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 Z98949.2-201ENST00000440996 144 ntBASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 SNRPGP5-201ENST00000456003 220 ntBASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 RNU7-187P-201ENST00000458985 68 ntBASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 AC106707.2-201ENST00000484182 374 ntBASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 RNU6-264P-201ENST00000517134 104 ntBASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 AC008489.1-201ENST00000524271 483 ntBASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 AC107016.1-201ENST00000550463 337 ntBASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 SDR42E1P2-201ENST00000614861 481 ntBASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.38□□□□□ -1.71
PDLIM7Q9NR12 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 SNORA31-201ENST00000362607 130 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 RNA5SP97-201ENST00000365006 84 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 U1.1-201ENST00000384101 164 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 RNU6-842P-201ENST00000384269 107 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 HSPE1P8-201ENST00000406997 288 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 RNU6-55P-201ENST00000411092 107 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 RPS6P12-201ENST00000432491 726 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 AC008264.1-201ENST00000447612 367 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 RNU6-953P-201ENST00000459154 107 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 AL133162.1-201ENST00000463228 453 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 AC010655.3-201ENST00000478818 450 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 RPL31P13-201ENST00000484151 370 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 RPL31P61-201ENST00000496160 376 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 HMGN1P11-201ENST00000508668 303 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 RNU6-307P-201ENST00000516743 106 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 RN7SKP258-201ENST00000517151 304 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 Y_RNA.721-201ENST00000517207 102 ntBASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.37□□□□□ -1.71
PDLIM7Q9NR12 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 RNU6-371P-201ENST00000364283 108 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 RNU6-101P-201ENST00000410323 104 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 RNU6-847P-201ENST00000411115 108 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 BX842559.1-201ENST00000419615 532 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 MRPS18CP6-201ENST00000423587 223 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 AL591419.1-201ENST00000427423 339 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 AL645568.3-201ENST00000433683 316 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 RNU7-138P-201ENST00000459479 64 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 RPL21P41-201ENST00000459863 264 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 RPL37P6-201ENST00000460682 294 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 RNU4-77P-201ENST00000516692 156 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 SNORA31.20-201ENST00000517111 133 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 RNU6-840P-201ENST00000517275 65 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 ERHP1-201ENST00000523006 310 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 AC005899.2-201ENST00000584353 90 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 ELOCP5-201ENST00000604924 333 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 AC012603.1-201ENST00000606424 528 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 MIR15A-201ENST00000607334 83 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 AC100812.1-201ENST00000607622 580 ntBASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.36□□□□□ -1.71
PDLIM7Q9NR12 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 PRO1804-201ENST00000623780 2050 ntBASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM7Q9NR12 Y_RNA.151-201ENST00000363566 112 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms