Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 ZNF680P1-201ENST00000436625 1469 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 RNU6-778P-201ENST00000363269 103 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 SNORA62.1-201ENST00000364287 154 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 RNA5SP139-201ENST00000364340 117 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 RNU6-395P-201ENST00000365662 106 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 Y_RNA.576-201ENST00000384781 102 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 OR2B8P-201ENST00000432841 938 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 AL353705.1-201ENST00000433468 480 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 BRK1P2-201ENST00000442875 223 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 RPL26P9-201ENST00000457466 433 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 RNU6-703P-201ENST00000516946 107 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 AC005476.1-201ENST00000554427 397 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 NUTF2P8-201ENST00000604593 363 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 AL033523.1-201ENST00000605153 153 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 AL158032.1-201ENST00000605401 106 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 AC008536.2-201ENST00000607284 349 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 AL158209.2-201ENST00000619266 216 ntBASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.11□□□□□ -1.91
POLR1BQ9H9Y6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 MTND5P19-201ENST00000424872 1794 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 SNORA4.3-201ENST00000365564 137 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 RNU1-73P-201ENST00000383971 164 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 AL160275.3-201ENST00000423876 471 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 AL596276.1-201ENST00000434465 418 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 RPS15AP9-201ENST00000439856 381 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 ATP5C1P1-201ENST00000441945 895 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 AC126182.1-201ENST00000478134 357 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 RN7SL429P-201ENST00000479090 223 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 RN7SL489P-201ENST00000486185 223 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 RN7SL327P-201ENST00000488659 223 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 SUMO2P6-201ENST00000505273 288 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 AC104806.1-201ENST00000508720 308 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 RNA5SP385-201ENST00000515947 110 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 RNA5SP503-201ENST00000517047 117 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 AP001893.2-201ENST00000526949 202 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 AL157871.3-201ENST00000557231 293 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 MIR4506-201ENST00000584693 77 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 RPL12P50-201ENST00000603116 116 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 AC012557.2-201ENST00000605919 418 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 AP001330.5-201ENST00000607176 411 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 RN7SL853P-201ENST00000617250 223 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 AC011155.2-201ENST00000623202 216 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 MIR6863-201ENST00000636112 90 ntBASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
POLR1BQ9H9Y6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 Y_RNA.33-201ENST00000362591 102 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 RNU1-105P-201ENST00000363470 161 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 SNORA51.4-201ENST00000364993 124 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 MTCO3P40-201ENST00000392516 676 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 AL365496.1-201ENST00000426885 215 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 MTND1P18-201ENST00000448191 573 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 ELOCP23-201ENST00000452014 332 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 TRBV1-201ENST00000476502 284 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 EIF4EP3-201ENST00000498782 656 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 SUB1P1-201ENST00000524415 382 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 H3F3AP1-201ENST00000559984 334 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 AL138889.2-201ENST00000603883 242 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 AC004832.5-201ENST00000608677 401 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 AC122108.2-201ENST00000611946 526 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 ATP5A1P2-202ENST00000616464 443 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 AL359880.1-201ENST00000621879 266 ntBASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 AC084035.1-201ENST00000634543 607 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms