Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.36□□□□□ -1.87
CDT1Q9H211 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.36□□□□□ -1.87
CDT1Q9H211 AL121757.2-201ENST00000611223 313 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.36□□□□□ -1.87
CDT1Q9H211 AC007742.2-201ENST00000618226 398 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.36□□□□□ -1.87
CDT1Q9H211 U7.8-201ENST00000619968 63 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 AC100810.6-201ENST00000638068 285 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.36□□□□□ -1.87
CDT1Q9H211 AC002546.1-201ENST00000588041 2504 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDT1Q9H211 SDAD1P2-201ENST00000441308 2028 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.35□□□□□ -1.87
CDT1Q9H211 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDT1Q9H211 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDT1Q9H211 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDT1Q9H211 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDT1Q9H211 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDT1Q9H211 AC073325.2-201ENST00000339545 159 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 Y_RNA.11-201ENST00000362375 109 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 RNU6-845P-201ENST00000362578 103 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 SNORA62.1-201ENST00000364287 154 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 RNU4-48P-201ENST00000365559 182 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 RNU6-946P-201ENST00000383878 107 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 SNORA24.1-201ENST00000384401 135 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 Y_RNA.535-201ENST00000384612 99 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 MIR454-201ENST00000390180 115 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDT1Q9H211 AL138885.1-201ENST00000405921 675 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 RN7SKP220-201ENST00000410611 288 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.35□□□□□ -1.87
CDT1Q9H211 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.35□□□□□ -1.87
CDT1Q9H211 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.35□□□□□ -1.87
CDT1Q9H211 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.35□□□□□ -1.87
CDT1Q9H211 TAAR7P-201ENST00000436141 242 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 RPS12P18-201ENST00000442381 270 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.35□□□□□ -1.87
CDT1Q9H211 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.35□□□□□ -1.87
CDT1Q9H211 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.35□□□□□ -1.87
CDT1Q9H211 MRPS17P3-201ENST00000465453 385 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 S100A11P2-201ENST00000467589 312 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 RPS4XP22-201ENST00000480755 780 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.35□□□□□ -1.87
CDT1Q9H211 EIF4EP3-201ENST00000498782 656 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDT1Q9H211 AL359273.1-201ENST00000510918 627 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.35□□□□□ -1.87
CDT1Q9H211 RN7SKP258-201ENST00000517151 304 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.35□□□□□ -1.87
CDT1Q9H211 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.35□□□□□ -1.87
CDT1Q9H211 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.35□□□□□ -1.87
CDT1Q9H211 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.35□□□□□ -1.87
CDT1Q9H211 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.35□□□□□ -1.87
CDT1Q9H211 AC018638.8-201ENST00000588755 281 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 NRBF2P5-201ENST00000603087 788 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 AC007619.2-201ENST00000605743 379 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 AP002826.1-201ENST00000608835 315 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 AL591516.1-201ENST00000611326 274 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 AL390240.1-201ENST00000612950 384 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 AC009233.1-201ENST00000616477 371 ntBASIC3.35□□□□□ -1.87
CDT1Q9H211 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.35□□□□□ -1.87
CDT1Q9H211 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDT1Q9H211 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDT1Q9H211 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDT1Q9H211 RIOK3P1-201ENST00000418778 1528 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 RNU6-767P-201ENST00000384132 107 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 UBE2V1P2-201ENST00000397758 440 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 AC096664.2-201ENST00000411843 406 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 AL451054.2-201ENST00000420896 202 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 NEFMP1-201ENST00000443423 1006 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.34□□□□□ -1.87
CDT1Q9H211 AC073415.1-201ENST00000449240 153 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.34□□□□□ -1.87
CDT1Q9H211 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.34□□□□□ -1.87
CDT1Q9H211 RN7SL330P-201ENST00000469709 307 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 RPL31P60-201ENST00000478450 367 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.34□□□□□ -1.87
CDT1Q9H211 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.34□□□□□ -1.87
CDT1Q9H211 RNA5SP217-201ENST00000515959 91 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 AC009812.2-201ENST00000517657 457 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 AC107953.1-201ENST00000522216 297 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 OR5AL2P-201ENST00000532185 920 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.34□□□□□ -1.87
CDT1Q9H211 AC093027.1-201ENST00000546698 429 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.34□□□□□ -1.87
CDT1Q9H211 AC106782.4-201ENST00000568264 210 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 RPL23AP84-201ENST00000571193 464 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 MIR3921-201ENST00000577308 85 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 MIR4795-201ENST00000584182 89 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.34□□□□□ -1.87
CDT1Q9H211 DISC2.1-201ENST00000612827 205 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 AC090617.10-201ENST00000624308 134 ntBASIC3.34□□□□□ -1.87
CDT1Q9H211 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.34□□□□□ -1.87
CDT1Q9H211 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CDT1Q9H211 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CDT1Q9H211 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.33□□□□□ -1.88
CDT1Q9H211 MIR22-201ENST00000362190 85 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 RNU6-179P-201ENST00000363350 107 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 SNORD56.3-201ENST00000363507 71 ntBASIC3.33□□□□□ -1.88
CDT1Q9H211 Y_RNA.255-201ENST00000364581 97 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 436 ms