Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-840P-201ENST00000517275 65 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 AC133555.2-201ENST00000550213 292 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 TRAV37-201ENST00000553906 342 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 EDDM3DP-201ENST00000554692 434 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 AC209154.1-201ENST00000582156 337 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 MIR4480-201ENST00000582492 71 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 RPL7P50-201ENST00000600588 727 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 AC037487.3-201ENST00000606668 112 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 AC091895.1-201ENST00000624494 256 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 Z99571.1-201ENST00000636677 394 ntBASIC5.09□□□□□ -1.59
NUCKS1Q9H1E3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.09□□□□□ -1.6
NUCKS1Q9H1E3 SAMMSON-226ENST00000642089 1582 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 RNA5SP191-201ENST00000362585 102 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 RNU6-1301P-201ENST00000362724 104 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 RNU1-20P-201ENST00000363314 162 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 RNU6-1155P-201ENST00000363554 107 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 RN7SKP103-201ENST00000363848 320 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 RNU6-1130P-201ENST00000365434 107 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.435-201ENST00000384095 112 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 RNU6-131P-201ENST00000391144 107 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 U3.30-201ENST00000391308 210 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 AL592045.1-201ENST00000429867 352 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 AC140059.1-201ENST00000489238 361 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 uc_338.18-201ENST00000615451 175 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 AC100827.5-201ENST00000615883 426 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 MTND1P7-201ENST00000632801 297 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 MIR4275-201ENST00000636486 87 ntBASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUCKS1Q9H1E3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.82-201ENST00000363000 102 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.92-201ENST00000363043 102 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.235-201ENST00000364412 102 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.306-201ENST00000365015 102 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.312-201ENST00000365089 102 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.322-201ENST00000365151 102 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.343-201ENST00000365354 112 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 SNORD116-18-201ENST00000383961 92 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 NDUFS5P3-201ENST00000450668 321 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.650-201ENST00000459002 102 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 RPL37P6-202ENST00000464216 403 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 OR7H2P-201ENST00000513483 306 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 RNU7-175P-201ENST00000515915 61 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 RNY3P16-201ENST00000516338 101 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 RNU6-612P-201ENST00000516909 102 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.777-201ENST00000516982 102 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 FAM60BP-201ENST00000578364 658 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.771-201ENST00000598668 102 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 SNORD113-5-201ENST00000607261 78 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.789-201ENST00000622480 102 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 AC015813.6-201ENST00000624409 5808 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 AL133412.1-201ENST00000380194 2992 ntBASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NUCKS1Q9H1E3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 AC011266.1-201ENST00000624119 3569 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.568-201ENST00000384742 113 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 MIR585-201ENST00000384887 94 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms