Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SDAD1P2-201ENST00000441308 2028 ntBASIC2.56□□□□□ -2
VGLL1Q99990 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.55□□□□□ -2
VGLL1Q99990 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
VGLL1Q99990 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
VGLL1Q99990 SNORD56.3-201ENST00000363507 71 ntBASIC2.55□□□□□ -2
VGLL1Q99990 RNU6-371P-201ENST00000364283 108 ntBASIC2.55□□□□□ -2
VGLL1Q99990 RNA5SP515-201ENST00000364570 118 ntBASIC2.55□□□□□ -2
VGLL1Q99990 SNORA51.4-201ENST00000364993 124 ntBASIC2.55□□□□□ -2
VGLL1Q99990 Y_RNA.399-201ENST00000383955 105 ntBASIC2.55□□□□□ -2
VGLL1Q99990 MIR514A1-201ENST00000385133 98 ntBASIC2.55□□□□□ -2
VGLL1Q99990 CISD1P1-201ENST00000393907 327 ntBASIC2.55□□□□□ -2
VGLL1Q99990 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.55□□□□□ -2
VGLL1Q99990 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.55□□□□□ -2
VGLL1Q99990 AL035423.1-201ENST00000420331 213 ntBASIC2.55□□□□□ -2
VGLL1Q99990 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.55□□□□□ -2
VGLL1Q99990 AC091390.3-201ENST00000426478 338 ntBASIC2.55□□□□□ -2
VGLL1Q99990 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.55□□□□□ -2
VGLL1Q99990 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.55□□□□□ -2
VGLL1Q99990 RPS24P13-201ENST00000442520 397 ntBASIC2.55□□□□□ -2
VGLL1Q99990 NOTCH2P1-201ENST00000443481 624 ntBASIC2.55□□□□□ -2
VGLL1Q99990 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.55□□□□□ -2
VGLL1Q99990 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.55□□□□□ -2
VGLL1Q99990 DYNLL1P5-201ENST00000467158 270 ntBASIC2.55□□□□□ -2
VGLL1Q99990 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.55□□□□□ -2
VGLL1Q99990 MTND4LP22-201ENST00000508209 276 ntBASIC2.55□□□□□ -2
VGLL1Q99990 RN7SKP18-201ENST00000516005 275 ntBASIC2.55□□□□□ -2
VGLL1Q99990 SNORA19.2-201ENST00000516013 114 ntBASIC2.55□□□□□ -2
VGLL1Q99990 RNU2-69P-201ENST00000516061 100 ntBASIC2.55□□□□□ -2
VGLL1Q99990 RNU6-927P-201ENST00000516199 100 ntBASIC2.55□□□□□ -2
VGLL1Q99990 Y_RNA.701-201ENST00000516812 110 ntBASIC2.55□□□□□ -2
VGLL1Q99990 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.55□□□□□ -2
VGLL1Q99990 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.55□□□□□ -2
VGLL1Q99990 SNRPGP16-201ENST00000533275 226 ntBASIC2.55□□□□□ -2
VGLL1Q99990 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.55□□□□□ -2
VGLL1Q99990 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.55□□□□□ -2
VGLL1Q99990 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.55□□□□□ -2
VGLL1Q99990 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.55□□□□□ -2
VGLL1Q99990 AC017071.1-201ENST00000564407 2204 ntBASIC2.55□□□□□ -2
VGLL1Q99990 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.55□□□□□ -2
VGLL1Q99990 POLR3GP2-201ENST00000588366 668 ntBASIC2.55□□□□□ -2
VGLL1Q99990 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.55□□□□□ -2
VGLL1Q99990 AC005498.1-201ENST00000592125 465 ntBASIC2.55□□□□□ -2
VGLL1Q99990 AC243960.4-201ENST00000600532 288 ntBASIC2.55□□□□□ -2
VGLL1Q99990 AC022893.3-201ENST00000607665 437 ntBASIC2.55□□□□□ -2
VGLL1Q99990 AC093913.1-201ENST00000614178 329 ntBASIC2.55□□□□□ -2
VGLL1Q99990 AL355810.1-201ENST00000614629 552 ntBASIC2.55□□□□□ -2
VGLL1Q99990 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.55□□□□□ -2
VGLL1Q99990 MIR1302-1-201ENST00000637932 143 ntBASIC2.55□□□□□ -2
VGLL1Q99990 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
VGLL1Q99990 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
VGLL1Q99990 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VGLL1Q99990 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.54□□□□□ -2
VGLL1Q99990 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
VGLL1Q99990 MTND4P23-201ENST00000447723 1363 ntBASIC2.54□□□□□ -2
VGLL1Q99990 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.54□□□□□ -2
VGLL1Q99990 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VGLL1Q99990 RNA5SP197-201ENST00000363357 119 ntBASIC2.54□□□□□ -2
VGLL1Q99990 RNU6-288P-201ENST00000363690 104 ntBASIC2.54□□□□□ -2
VGLL1Q99990 RNU6-715P-201ENST00000365204 103 ntBASIC2.54□□□□□ -2
VGLL1Q99990 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VGLL1Q99990 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.54□□□□□ -2
VGLL1Q99990 XGY1-201ENST00000381172 446 ntBASIC2.54□□□□□ -2
VGLL1Q99990 RNU6-190P-201ENST00000384154 102 ntBASIC2.54□□□□□ -2
VGLL1Q99990 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.54□□□□□ -2
VGLL1Q99990 SNORD70.1-201ENST00000391007 85 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AL031121.1-201ENST00000406553 254 ntBASIC2.54□□□□□ -2
VGLL1Q99990 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.54□□□□□ -2
VGLL1Q99990 RNU6ATAC-201ENST00000408749 126 ntBASIC2.54□□□□□ -2
VGLL1Q99990 RPS12P24-201ENST00000412619 387 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AL160275.3-201ENST00000423876 471 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AC093151.1-201ENST00000427711 313 ntBASIC2.54□□□□□ -2
VGLL1Q99990 RPS3AP52-201ENST00000435639 297 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AC007677.1-201ENST00000445757 515 ntBASIC2.54□□□□□ -2
VGLL1Q99990 PRDX3P3-201ENST00000447765 522 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.54□□□□□ -2
VGLL1Q99990 FABP5P13-201ENST00000452144 328 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.54□□□□□ -2
VGLL1Q99990 PPP1R2P5-201ENST00000457256 603 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.54□□□□□ -2
VGLL1Q99990 VN1R104P-201ENST00000505115 1009 ntBASIC2.54□□□□□ -2
VGLL1Q99990 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.54□□□□□ -2
VGLL1Q99990 GMPSP1-201ENST00000514075 579 ntBASIC2.54□□□□□ -2
VGLL1Q99990 RNU6-677P-201ENST00000516914 101 ntBASIC2.54□□□□□ -2
VGLL1Q99990 RNA5SP471-201ENST00000516971 106 ntBASIC2.54□□□□□ -2
VGLL1Q99990 RNU6-840P-201ENST00000517275 65 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.54□□□□□ -2
VGLL1Q99990 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.54□□□□□ -2
VGLL1Q99990 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.54□□□□□ -2
VGLL1Q99990 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.54□□□□□ -2
VGLL1Q99990 AL355836.1-201ENST00000555951 870 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AC012182.1-201ENST00000570133 895 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.54□□□□□ -2
VGLL1Q99990 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.54□□□□□ -2
VGLL1Q99990 MIR3672-201ENST00000584290 82 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AC092747.3-201ENST00000603769 301 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AL138889.2-201ENST00000603883 242 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AC113139.1-201ENST00000605049 239 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AL670379.4-201ENST00000605279 254 ntBASIC2.54□□□□□ -2
VGLL1Q99990 MIR15A-201ENST00000607334 83 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms