Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.11□□□□□ -1.91
NEK1Q96PY6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.11□□□□□ -1.91
NEK1Q96PY6 AC087241.4-201ENST00000612441 480 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.11□□□□□ -1.91
NEK1Q96PY6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.11□□□□□ -1.91
NEK1Q96PY6 AC010680.1-201ENST00000590024 3590 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NEK1Q96PY6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.1□□□□□ -1.91
NEK1Q96PY6 AC026241.1-201ENST00000517873 2142 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 OR56A5-201ENST00000340110 738 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 Y_RNA.318-201ENST00000365131 97 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
NEK1Q96PY6 MIR592-201ENST00000384959 97 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 RNA5SP210-201ENST00000391034 120 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 USP9YP20-201ENST00000419224 558 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.1□□□□□ -1.91
NEK1Q96PY6 AC092047.1-201ENST00000424997 240 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 AL136380.1-201ENST00000447970 162 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.1□□□□□ -1.91
NEK1Q96PY6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.1□□□□□ -1.91
NEK1Q96PY6 RPL37P6-201ENST00000460682 294 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 AL135752.1-201ENST00000479477 471 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 RN7SKP298-201ENST00000515950 94 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 RNU6-928P-201ENST00000516876 104 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 RNU6-1092P-201ENST00000516955 87 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.1□□□□□ -1.91
NEK1Q96PY6 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.1□□□□□ -1.91
NEK1Q96PY6 MTCYBP33-201ENST00000575007 1130 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 MTND1P15-201ENST00000579262 949 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 AL136363.1-201ENST00000605349 337 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 AC103591.3-201ENST00000608684 209 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 AC004852.3-201ENST00000614131 326 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 AC072046.2-201ENST00000618366 268 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.1□□□□□ -1.91
NEK1Q96PY6 MTND1P37-201ENST00000636562 264 ntBASIC3.1□□□□□ -1.91
NEK1Q96PY6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NEK1Q96PY6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.1□□□□□ -1.91
NEK1Q96PY6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
NEK1Q96PY6 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 HSPE1P11-201ENST00000339579 310 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 RNU6-288P-201ENST00000363690 104 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 RNU1-100P-201ENST00000365255 165 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 RNU6-169P-201ENST00000365336 107 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.09□□□□□ -1.91
NEK1Q96PY6 RNU6-198P-201ENST00000384258 104 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 AL356057.2-201ENST00000403318 432 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 RNU2-33P-201ENST00000410344 192 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NEK1Q96PY6 RPLP0P7-201ENST00000416050 667 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 RPS24P1-201ENST00000438550 371 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.09□□□□□ -1.91
NEK1Q96PY6 MTND4P25-201ENST00000441039 533 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 AC013267.1-201ENST00000458227 267 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 SNORD109B-201ENST00000458961 67 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 SNORD109A-201ENST00000459128 67 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 Y_RNA.638-201ENST00000459374 113 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.09□□□□□ -1.91
NEK1Q96PY6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NEK1Q96PY6 AL160314.1-201ENST00000490836 438 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 AIG1P1-201ENST00000503376 148 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 MTND3P5-201ENST00000512798 333 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 RNA5SP290-201ENST00000517133 127 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.09□□□□□ -1.91
NEK1Q96PY6 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.09□□□□□ -1.91
NEK1Q96PY6 AC091544.4-201ENST00000555268 342 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 AC245014.2-201ENST00000603689 287 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 AC007363.1-201ENST00000604736 620 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 AC246785.4-201ENST00000605374 287 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 AL139286.2-201ENST00000606838 396 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 AP002360.4-201ENST00000606980 481 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 AC109347.2-201ENST00000610220 349 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.09□□□□□ -1.91
NEK1Q96PY6 AC073308.1-201ENST00000623696 305 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.09□□□□□ -1.91
NEK1Q96PY6 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NEK1Q96PY6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
NEK1Q96PY6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
NEK1Q96PY6 Y_RNA.194-201ENST00000363985 102 ntBASIC3.08□□□□□ -1.92
NEK1Q96PY6 SMIM11P1-201ENST00000369586 178 ntBASIC3.08□□□□□ -1.92
NEK1Q96PY6 RNU6-1119P-201ENST00000384349 108 ntBASIC3.08□□□□□ -1.92
NEK1Q96PY6 RNU2-52P-201ENST00000410680 190 ntBASIC3.08□□□□□ -1.92
NEK1Q96PY6 AC104651.1-201ENST00000427559 735 ntBASIC3.08□□□□□ -1.92
NEK1Q96PY6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.08□□□□□ -1.92
NEK1Q96PY6 AL358934.1-201ENST00000432346 324 ntBASIC3.08□□□□□ -1.92
NEK1Q96PY6 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.08□□□□□ -1.92
NEK1Q96PY6 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.08□□□□□ -1.92
NEK1Q96PY6 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.08□□□□□ -1.92
NEK1Q96PY6 DDX3P2-201ENST00000446138 111 ntBASIC3.08□□□□□ -1.92
NEK1Q96PY6 snoU13.28-201ENST00000459235 104 ntBASIC3.08□□□□□ -1.92
NEK1Q96PY6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.08□□□□□ -1.92
NEK1Q96PY6 RNA5SP282-201ENST00000516355 108 ntBASIC3.08□□□□□ -1.92
NEK1Q96PY6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.08□□□□□ -1.92
NEK1Q96PY6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.08□□□□□ -1.92
NEK1Q96PY6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.08□□□□□ -1.92
NEK1Q96PY6 AC008739.2-201ENST00000597006 317 ntBASIC3.08□□□□□ -1.92
NEK1Q96PY6 AC073648.5-201ENST00000603502 305 ntBASIC3.08□□□□□ -1.92
NEK1Q96PY6 AL589743.7-201ENST00000612637 233 ntBASIC3.08□□□□□ -1.92
NEK1Q96PY6 AC091834.1-201ENST00000614543 472 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms