Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.96□□□□□ -2.26
AP1S3Q96PC3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AL121821.2-201ENST00000556081 394 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC023813.2-201ENST00000564321 469 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC005668.1-201ENST00000571142 476 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC012213.3-201ENST00000577199 777 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 ELOCP5-201ENST00000604924 333 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC069304.2-201ENST00000605154 435 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC021646.1-201ENST00000605469 484 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 NDUFA8P1-201ENST00000605525 367 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.96□□□□□ -2.26
AP1S3Q96PC3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC011939.3-201ENST00000613686 466 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 VN1R9P-201ENST00000614184 867 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC099842.1-201ENST00000619919 596 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC132825.7-201ENST00000638744 335 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
AP1S3Q96PC3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
AP1S3Q96PC3 MTCO1P9-201ENST00000505577 1534 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 RNU6-439P-201ENST00000384188 106 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 RNU11-3P-201ENST00000391111 133 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 MTCO2P31-201ENST00000402702 684 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 RNU2-48P-201ENST00000410694 191 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 AC127391.1-201ENST00000411737 98 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 AL353621.1-201ENST00000418219 243 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 AC007435.1-201ENST00000421086 415 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 C1DP1-201ENST00000426049 402 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.95□□□□□ -2.26
AP1S3Q96PC3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.95□□□□□ -2.26
AP1S3Q96PC3 RPS15AP17-201ENST00000470598 390 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 AC011005.2-201ENST00000487324 359 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 MTND4P2-201ENST00000507767 1203 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 RNU6-902P-201ENST00000517212 91 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 RNU6-840P-201ENST00000517275 65 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 AP004247.1-201ENST00000531556 1289 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.95□□□□□ -2.26
AP1S3Q96PC3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.95□□□□□ -2.26
AP1S3Q96PC3 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.95□□□□□ -2.26
AP1S3Q96PC3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.95□□□□□ -2.26
AP1S3Q96PC3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.95□□□□□ -2.26
AP1S3Q96PC3 AC079416.3-201ENST00000624479 549 ntBASIC0.95□□□□□ -2.26
AP1S3Q96PC3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
AP1S3Q96PC3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.95□□□□□ -2.26
AP1S3Q96PC3 AP005901.5-201ENST00000545779 1796 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
AP1S3Q96PC3 RNU4-13P-201ENST00000364019 141 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 RNU6-353P-201ENST00000364266 108 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 Y_RNA.500-201ENST00000384466 111 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 RNU6-939P-201ENST00000384634 107 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 MIR597-201ENST00000384968 97 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 MIR618-201ENST00000385287 98 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 SNORA67.5-201ENST00000391036 107 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 DHFRP6-201ENST00000401776 268 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AL139397.2-201ENST00000404529 772 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 RNU6-174P-201ENST00000410406 106 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 MTCYBP38-201ENST00000417160 1123 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.94□□□□□ -2.26
AP1S3Q96PC3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AC092648.1-201ENST00000425870 423 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AL590623.1-201ENST00000427864 105 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 ELOCP14-201ENST00000428070 331 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.94□□□□□ -2.26
AP1S3Q96PC3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.94□□□□□ -2.26
AP1S3Q96PC3 NANOGP2-201ENST00000435391 727 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 HMGB3P12-201ENST00000438745 556 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 USP9YP22-201ENST00000438971 294 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 ELOCP7-201ENST00000439968 331 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AC245517.4-201ENST00000448601 281 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.94□□□□□ -2.26
AP1S3Q96PC3 RNA5SP445-201ENST00000515889 115 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 RNA5SP290-201ENST00000517133 127 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 OR5B19P-201ENST00000531766 928 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AP000916.1-201ENST00000533869 835 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AC125611.1-201ENST00000549563 229 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.94□□□□□ -2.26
AP1S3Q96PC3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AC068338.1-201ENST00000565567 176 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AC103987.3-201ENST00000582071 292 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AL596245.1-201ENST00000618994 362 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AC084824.4-201ENST00000620106 731 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AC002550.2-201ENST00000621246 394 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 AC091965.5-201ENST00000624785 342 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 DBF4P1-201ENST00000412976 1892 ntBASIC0.94□□□□□ -2.26
AP1S3Q96PC3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
AP1S3Q96PC3 RNU6-1032P-201ENST00000384100 107 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 MIR1262-201ENST00000408276 93 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 RNA5SP100-201ENST00000410903 110 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 RNA5SP59-201ENST00000410922 110 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 LUZP4P1-201ENST00000415420 344 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 AL121882.1-201ENST00000422893 417 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.93□□□□□ -2.26
AP1S3Q96PC3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms