Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LRCH3Q96II8 RNU6-527P-201ENST00000363425 104 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.52□□□□□ -1.53
LRCH3Q96II8 RNU6-643P-201ENST00000384018 107 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 RNU6-768P-201ENST00000384683 107 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 MTHFD2P2-201ENST00000407725 247 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 RPL21P66-201ENST00000426566 466 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 AL078601.1-201ENST00000444542 271 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 RN7SL197P-201ENST00000466981 299 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 AC011276.1-201ENST00000469688 323 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 RPS29P24-201ENST00000486345 171 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 AC139453.3-201ENST00000493276 369 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 RNU6-572P-201ENST00000516724 80 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 AL391813.1-201ENST00000603098 260 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 AL078604.3-201ENST00000615580 211 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.52□□□□□ -1.53
LRCH3Q96II8 SNORA43.4-201ENST00000629559 138 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.52□□□□□ -1.53
LRCH3Q96II8 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LRCH3Q96II8 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LRCH3Q96II8 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LRCH3Q96II8 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
LRCH3Q96II8 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRCH3Q96II8 AC026523.2-201ENST00000625039 7739 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRCH3Q96II8 MIR450A1-201ENST00000362262 91 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 RNU6-873P-201ENST00000363833 107 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 SNORD115-8-201ENST00000363856 82 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 SNORD115-38-201ENST00000365037 82 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 RNU6-72P-201ENST00000384285 79 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 SNORA8.3-201ENST00000384679 139 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 RNU6-588P-201ENST00000410281 105 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 RNU2-54P-201ENST00000410299 190 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 AL121914.1-201ENST00000450188 156 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 snoU13.3-201ENST00000459441 104 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 Y_RNA.677-201ENST00000516401 85 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 RNU6-537P-201ENST00000517277 103 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 MIR6133-201ENST00000617057 108 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 SCARNA4-202ENST00000625402 129 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRCH3Q96II8 AC006206.1-201ENST00000544842 3387 ntBASIC5.51□□□□□ -1.53
LRCH3Q96II8 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRCH3Q96II8 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRCH3Q96II8 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.51□□□□□ -1.53
LRCH3Q96II8 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.51□□□□□ -1.53
LRCH3Q96II8 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRCH3Q96II8 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRCH3Q96II8 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRCH3Q96II8 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRCH3Q96II8 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
LRCH3Q96II8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.5□□□□□ -1.53
LRCH3Q96II8 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.5□□□□□ -1.53
LRCH3Q96II8 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRCH3Q96II8 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRCH3Q96II8 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRCH3Q96II8 MAPK10-263ENST00000641052 4307 ntBASIC5.5□□□□□ -1.53
LRCH3Q96II8 AL590240.1-201ENST00000334118 313 ntBASIC5.5□□□□□ -1.53
LRCH3Q96II8 RNU6-801P-201ENST00000364087 105 ntBASIC5.5□□□□□ -1.53
LRCH3Q96II8 RN7SKP280-201ENST00000364196 304 ntBASIC5.5□□□□□ -1.53
LRCH3Q96II8 Y_RNA.329-201ENST00000365209 107 ntBASIC5.5□□□□□ -1.53
LRCH3Q96II8 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.5□□□□□ -1.53
LRCH3Q96II8 RPEP3-201ENST00000425462 676 ntBASIC5.5□□□□□ -1.53
LRCH3Q96II8 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.5□□□□□ -1.53
LRCH3Q96II8 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.5□□□□□ -1.53
LRCH3Q96II8 AL589765.3-201ENST00000446084 462 ntBASIC5.5□□□□□ -1.53
LRCH3Q96II8 RNU6-1198P-201ENST00000516904 67 ntBASIC5.5□□□□□ -1.53
LRCH3Q96II8 AC137627.1-201ENST00000545761 289 ntBASIC5.5□□□□□ -1.53
LRCH3Q96II8 AC013791.1-201ENST00000616619 62 ntBASIC5.5□□□□□ -1.53
LRCH3Q96II8 MIR6853-201ENST00000619642 74 ntBASIC5.5□□□□□ -1.53
LRCH3Q96II8 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.5□□□□□ -1.53
LRCH3Q96II8 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
LRCH3Q96II8 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.5□□□□□ -1.53
LRCH3Q96II8 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.5□□□□□ -1.53
LRCH3Q96II8 AP001029.2-203ENST00000589795 4910 ntBASIC5.5□□□□□ -1.53
LRCH3Q96II8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LRCH3Q96II8 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
LRCH3Q96II8 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRCH3Q96II8 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRCH3Q96II8 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRCH3Q96II8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.49□□□□□ -1.53
LRCH3Q96II8 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.49□□□□□ -1.53
LRCH3Q96II8 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.49□□□□□ -1.53
LRCH3Q96II8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.49□□□□□ -1.53
LRCH3Q96II8 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.49□□□□□ -1.53
LRCH3Q96II8 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
LRCH3Q96II8 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
LRCH3Q96II8 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRCH3Q96II8 MIR133A2-201ENST00000347538 102 ntBASIC5.49□□□□□ -1.53
LRCH3Q96II8 Y_RNA.388-201ENST00000383919 113 ntBASIC5.49□□□□□ -1.53
LRCH3Q96II8 MIR514A1-201ENST00000385133 98 ntBASIC5.49□□□□□ -1.53
LRCH3Q96II8 SNORA26.5-201ENST00000391215 123 ntBASIC5.49□□□□□ -1.53
LRCH3Q96II8 AL160275.2-201ENST00000412010 394 ntBASIC5.49□□□□□ -1.53
LRCH3Q96II8 RPS29P10-201ENST00000439197 166 ntBASIC5.49□□□□□ -1.53
LRCH3Q96II8 AC243964.1-201ENST00000441814 261 ntBASIC5.49□□□□□ -1.53
LRCH3Q96II8 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.49□□□□□ -1.53
LRCH3Q96II8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.49□□□□□ -1.53
LRCH3Q96II8 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRCH3Q96II8 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.49□□□□□ -1.53
LRCH3Q96II8 MIR3121-201ENST00000579680 77 ntBASIC5.49□□□□□ -1.53
LRCH3Q96II8 AL670379.3-201ENST00000605040 251 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms