Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 RNA5SP471-201ENST00000516971 106 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 CASP1P1-201ENST00000526345 212 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 AC004217.3-201ENST00000551552 878 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.76□□□□□ -2.29
TTC28Q96AY4 RNU6-152P-201ENST00000384037 107 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.76□□□□□ -2.29
TTC28Q96AY4 RPL7L1P10-201ENST00000427790 463 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.76□□□□□ -2.29
TTC28Q96AY4 AC068135.1-201ENST00000446164 246 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 RPS29P28-201ENST00000446439 141 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 OR6K5P-201ENST00000447050 945 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.76□□□□□ -2.29
TTC28Q96AY4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.76□□□□□ -2.29
TTC28Q96AY4 AC022662.1-201ENST00000580252 331 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 AC090616.3-201ENST00000582184 217 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 AL078605.1-201ENST00000603529 500 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC0.75□□□□□ -2.29
TTC28Q96AY4 CCT4P2-201ENST00000233836 1548 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 CR848007.1-201ENST00000442354 1699 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 SNORA63.3-201ENST00000362682 132 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 Y_RNA.117-201ENST00000363294 101 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 RNU6-891P-201ENST00000384280 111 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 RNY3P14-201ENST00000384309 102 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 CIR1P3-201ENST00000405137 479 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.75□□□□□ -2.29
TTC28Q96AY4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.75□□□□□ -2.29
TTC28Q96AY4 AC098614.2-201ENST00000426040 255 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 AC015922.2-201ENST00000435593 184 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 NDUFB4P2-201ENST00000509515 391 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 RNU6-488P-201ENST00000515918 99 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.75□□□□□ -2.29
TTC28Q96AY4 CR383656.7-201ENST00000548164 174 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
TTC28Q96AY4 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.75□□□□□ -2.29
TTC28Q96AY4 MIR3616-201ENST00000584070 92 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.75□□□□□ -2.29
TTC28Q96AY4 AC023932.2-201ENST00000603176 175 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 AC243829.3-201ENST00000622177 108 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 TPTE2P4-201ENST00000258589 1605 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
TTC28Q96AY4 SNORD114-2-201ENST00000363953 78 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 SNORA68.1-201ENST00000364537 132 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 RNA5SP125-201ENST00000364843 120 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 RNU6-234P-201ENST00000365229 104 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TTC28Q96AY4 MTCO1P3-201ENST00000429327 192 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 USP12PX-201ENST00000432383 1057 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 MICF-203ENST00000432679 129 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 AL353706.1-201ENST00000436728 494 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.75□□□□□ -2.29
TTC28Q96AY4 AL121769.1-201ENST00000469473 401 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 VPS26AP1-201ENST00000483197 979 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.75□□□□□ -2.29
TTC28Q96AY4 AC117454.1-201ENST00000491120 168 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.75□□□□□ -2.29
TTC28Q96AY4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.75□□□□□ -2.29
TTC28Q96AY4 AC118273.2-201ENST00000532092 465 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.75□□□□□ -2.29
TTC28Q96AY4 AC004775.1-201ENST00000607389 753 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
TTC28Q96AY4 uc_338.14-201ENST00000613162 166 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TTC28Q96AY4 AL356585.4-201ENST00000623078 1229 ntBASIC0.75□□□□□ -2.29
TTC28Q96AY4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
TTC28Q96AY4 RNU5D-1-201ENST00000363299 116 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 SNORD82-201ENST00000365530 70 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 OR1L1-202ENST00000373686 1083 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 MIR518A2-201ENST00000384966 87 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 SNORA46.1-201ENST00000391069 153 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.74□□□□□ -2.29
TTC28Q96AY4 SNORD56-201ENST00000413522 71 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 AL365496.1-201ENST00000426885 215 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.74□□□□□ -2.29
TTC28Q96AY4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.74□□□□□ -2.29
TTC28Q96AY4 AL714022.1-201ENST00000439897 151 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 OSTCP8-201ENST00000445117 448 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 RPS20P24-201ENST00000457473 361 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 snoU13.11-201ENST00000459219 104 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 AC092757.1-201ENST00000467293 467 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 AC116337.2-201ENST00000477662 156 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.74□□□□□ -2.29
TTC28Q96AY4 RPL31P60-201ENST00000478450 367 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 COL6A4P2-205ENST00000509855 506 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 AP005639.2-201ENST00000527592 928 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 AC108676.2-201ENST00000605225 163 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 HMGB1P24-202ENST00000615653 685 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 AL109659.3-201ENST00000624985 950 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 Y_RNA.403-201ENST00000383977 101 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 RNU6-955P-201ENST00000410497 104 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 RPS15AP38-201ENST00000413110 372 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 AC060773.1-201ENST00000421698 310 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 AL353689.1-201ENST00000438895 199 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 MTND6P13-201ENST00000443510 523 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 RPS27P26-201ENST00000494583 239 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
TTC28Q96AY4 MRPS33P3-201ENST00000513456 322 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 RNU6-27P-201ENST00000516146 107 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms