Protein–RNA interactions for Protein: Q969Q1

TRIM63, E3 ubiquitin-protein ligase TRIM63, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM63Q969Q1 RNU6-33P-201ENST00000384793 107 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 AL031121.1-201ENST00000406553 254 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 RNU6-908P-201ENST00000410160 94 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 MTND3P21-201ENST00000433774 331 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM63Q969Q1 HMGB1P31-201ENST00000437242 427 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 AL772161.1-201ENST00000439130 476 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM63Q969Q1 MTAPP1-201ENST00000489154 819 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 AC111000.3-201ENST00000508057 576 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM63Q969Q1 RNU6-1281P-201ENST00000516223 105 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM63Q969Q1 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM63Q969Q1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM63Q969Q1 AC104027.1-201ENST00000521887 300 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 MTND4P7-201ENST00000523876 130 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM63Q969Q1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM63Q969Q1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM63Q969Q1 AC090115.3-201ENST00000553218 849 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
TRIM63Q969Q1 MIR4646-201ENST00000580775 63 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM63Q969Q1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM63Q969Q1 RNU6-6P-201ENST00000606623 107 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 AC083809.1-201ENST00000615051 472 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 AC026585.1-201ENST00000619582 524 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 SCARNA4-202ENST00000625402 129 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM63Q969Q1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM63Q969Q1 AL356274.2-201ENST00000624379 3752 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM63Q969Q1 AC068647.1-201ENST00000489539 2265 ntBASIC3.16□□□□□ -1.9
TRIM63Q969Q1 RBBP8P1-201ENST00000449447 1844 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 Y_RNA.38-201ENST00000362617 102 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 MIR218-1-201ENST00000384999 110 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 SNORD37.1-201ENST00000390968 65 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 RNA5SP424-201ENST00000390988 115 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 MIR548F1-201ENST00000408667 84 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM63Q969Q1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM63Q969Q1 FABP5P14-201ENST00000437273 393 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 AL121601.2-201ENST00000438019 707 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM63Q969Q1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM63Q969Q1 RNU7-167P-201ENST00000459160 62 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM63Q969Q1 AC231760.1-201ENST00000498002 260 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 TBCAP3-201ENST00000512475 312 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 RNU4-29P-201ENST00000515943 174 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.15□□□□□ -1.91
TRIM63Q969Q1 AL512310.1-201ENST00000548639 172 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM63Q969Q1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM63Q969Q1 MIR4270-201ENST00000581799 70 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 MIR3117-201ENST00000584034 78 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 AC068790.6-201ENST00000602558 258 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 ATP1B3P1-201ENST00000605365 821 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM63Q969Q1 uc_338.14-201ENST00000613162 166 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM63Q969Q1 MIR6780A-201ENST00000615089 68 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 YWHAEP7-203ENST00000622054 312 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 AC098679.4-201ENST00000624241 654 ntBASIC3.15□□□□□ -1.91
TRIM63Q969Q1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
TRIM63Q969Q1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM63Q969Q1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM63Q969Q1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
TRIM63Q969Q1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM63Q969Q1 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM63Q969Q1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
TRIM63Q969Q1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
TRIM63Q969Q1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM63Q969Q1 RNU6-78P-201ENST00000362897 107 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 RNU6-266P-201ENST00000364225 107 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 Y_RNA.378-201ENST00000365652 113 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM63Q969Q1 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM63Q969Q1 SNORD116-20-201ENST00000384529 92 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 AC016397.1-201ENST00000412463 242 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM63Q969Q1 AC092427.1-202ENST00000430569 476 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM63Q969Q1 AC114755.5-201ENST00000447760 831 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 MTND3P16-201ENST00000452205 344 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 snoU13.22-201ENST00000459428 104 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 AP001025.1-201ENST00000486139 332 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 HMGN1P11-201ENST00000508668 303 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 MIR2276-201ENST00000516886 89 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM63Q969Q1 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM63Q969Q1 OR11H5P-201ENST00000554039 926 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 MIR3199-1-201ENST00000582434 88 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 MIR4765-201ENST00000585007 77 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM63Q969Q1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM63Q969Q1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM63Q969Q1 AC016769.4-201ENST00000616893 535 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms