Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC010587.2-201ENST00000511727 448 ntBASIC2.24□□□□□ -2.05
RNF139Q8WU17 SNORA31.25-201ENST00000517242 134 ntBASIC2.24□□□□□ -2.05
RNF139Q8WU17 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.24□□□□□ -2.05
RNF139Q8WU17 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.24□□□□□ -2.05
RNF139Q8WU17 MIR3126-201ENST00000577443 74 ntBASIC2.24□□□□□ -2.05
RNF139Q8WU17 NRBF2P1-201ENST00000587407 859 ntBASIC2.24□□□□□ -2.05
RNF139Q8WU17 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.24□□□□□ -2.05
RNF139Q8WU17 AC021171.1-201ENST00000603137 706 ntBASIC2.24□□□□□ -2.05
RNF139Q8WU17 AL596327.1-201ENST00000603629 213 ntBASIC2.24□□□□□ -2.05
RNF139Q8WU17 AL050303.3-201ENST00000613704 284 ntBASIC2.24□□□□□ -2.05
RNF139Q8WU17 AL136981.2-201ENST00000617319 734 ntBASIC2.24□□□□□ -2.05
RNF139Q8WU17 SDR42E1P4-201ENST00000620894 481 ntBASIC2.24□□□□□ -2.05
RNF139Q8WU17 AL031601.2-202ENST00000622650 282 ntBASIC2.24□□□□□ -2.05
RNF139Q8WU17 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
RNF139Q8WU17 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RNF139Q8WU17 AC008555.8-201ENST00000623602 2168 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RNF139Q8WU17 MIR513B-201ENST00000385136 84 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RNF139Q8WU17 U3.40-201ENST00000408706 208 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 AC097463.2-201ENST00000421074 142 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.23□□□□□ -2.05
RNF139Q8WU17 AC005094.1-201ENST00000440420 368 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 MTATP6P30-201ENST00000443540 664 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 EEF1E1P1-201ENST00000446998 430 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 AC055731.1-201ENST00000474387 401 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.23□□□□□ -2.05
RNF139Q8WU17 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.23□□□□□ -2.05
RNF139Q8WU17 AC109486.1-201ENST00000486833 374 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 RPS29P21-201ENST00000496272 170 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 CKS1BP2-201ENST00000497342 240 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.23□□□□□ -2.05
RNF139Q8WU17 SNORA31.3-201ENST00000516029 96 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 RNU2-19P-201ENST00000517288 84 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.23□□□□□ -2.05
RNF139Q8WU17 MTND4P33-201ENST00000556706 766 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.23□□□□□ -2.05
RNF139Q8WU17 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.23□□□□□ -2.05
RNF139Q8WU17 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.23□□□□□ -2.05
RNF139Q8WU17 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.23□□□□□ -2.05
RNF139Q8WU17 AC092106.3-201ENST00000611308 722 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 AC013470.4-201ENST00000619978 986 ntBASIC2.23□□□□□ -2.05
RNF139Q8WU17 AP006437.1-201ENST00000641440 3685 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RNF139Q8WU17 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.22□□□□□ -2.05
RNF139Q8WU17 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RNF139Q8WU17 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RNF139Q8WU17 TEX21P-201ENST00000447107 1476 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 MTND5P33-201ENST00000571250 1450 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RNF139Q8WU17 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RNF139Q8WU17 RNU6-83P-201ENST00000384568 112 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 SNORA64-201ENST00000384674 134 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 MIR19A-201ENST00000384878 82 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
RNF139Q8WU17 RNU6-278P-201ENST00000390945 109 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 AL356379.1-201ENST00000414105 126 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 AL353621.1-201ENST00000418219 243 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.22□□□□□ -2.05
RNF139Q8WU17 RPL7P34-201ENST00000433316 712 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 CR769776.1-201ENST00000441254 787 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 RPL7P12-201ENST00000446719 750 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.22□□□□□ -2.05
RNF139Q8WU17 AL118520.1-201ENST00000450770 291 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.22□□□□□ -2.05
RNF139Q8WU17 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.22□□□□□ -2.05
RNF139Q8WU17 RPL7P18-201ENST00000478965 734 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 AC091951.3-201ENST00000504093 246 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 AC020699.1-201ENST00000505161 445 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.22□□□□□ -2.05
RNF139Q8WU17 RNU1-41P-201ENST00000516161 162 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 RNU1-48P-201ENST00000516400 162 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 CBX3P7-201ENST00000532876 502 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RNF139Q8WU17 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.22□□□□□ -2.05
RNF139Q8WU17 DUXAP1-201ENST00000556632 463 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 DPPA3P3-201ENST00000603842 430 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 RNU6-88P-201ENST00000606801 100 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 AC087241.4-201ENST00000612441 480 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.22□□□□□ -2.05
RNF139Q8WU17 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
RNF139Q8WU17 AC010378.1-201ENST00000619270 362 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 AP000484.1-201ENST00000620067 1252 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 MIR219B-201ENST00000637023 88 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 AC104454.1-201ENST00000421341 1401 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 Z75746.1-201ENST00000440243 2080 ntBASIC2.22□□□□□ -2.05
RNF139Q8WU17 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.22□□□□□ -2.05
RNF139Q8WU17 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.22□□□□□ -2.05
RNF139Q8WU17 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.21□□□□□ -2.06
RNF139Q8WU17 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.21□□□□□ -2.06
RNF139Q8WU17 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
RNF139Q8WU17 RNU6-512P-201ENST00000364438 103 ntBASIC2.21□□□□□ -2.06
RNF139Q8WU17 CIR1P3-201ENST00000405137 479 ntBASIC2.21□□□□□ -2.06
RNF139Q8WU17 MTND1P23-201ENST00000416931 372 ntBASIC2.21□□□□□ -2.06
RNF139Q8WU17 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.21□□□□□ -2.06
RNF139Q8WU17 MTND2P9-201ENST00000422293 931 ntBASIC2.21□□□□□ -2.06
RNF139Q8WU17 TXNL1P1-201ENST00000429528 554 ntBASIC2.21□□□□□ -2.06
RNF139Q8WU17 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.21□□□□□ -2.06
RNF139Q8WU17 MTND3P1-201ENST00000441336 220 ntBASIC2.21□□□□□ -2.06
RNF139Q8WU17 AC009238.1-201ENST00000442165 424 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms