Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RNU5B-4P-201ENST00000363508 111 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 RNU6-637P-201ENST00000384050 107 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 USP9YP19-201ENST00000412165 485 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 USP9YP13-201ENST00000417797 480 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 AC007098.1-201ENST00000420122 367 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 AC098831.1-201ENST00000440661 216 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 MTCYBP42-201ENST00000444653 1130 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 USP9YP10-201ENST00000454868 628 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 snoU13.8-201ENST00000458890 104 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 RNU6-583P-201ENST00000516012 92 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 AP003049.1-201ENST00000529418 457 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 AL354943.1-201ENST00000572103 781 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 AC126118.1-201ENST00000607744 628 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 AL773524.1-201ENST00000614065 229 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 U2.21-201ENST00000637295 81 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 AC006927.2-201ENST00000639256 389 ntBASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CCDC112Q8NEF3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 MIR337-201ENST00000362281 93 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 RNU1-42P-201ENST00000364033 160 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 RNU6-1078P-201ENST00000364522 103 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 Y_RNA.408-201ENST00000383987 102 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 AL603865.2-201ENST00000401679 213 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 AC068533.2-201ENST00000411872 306 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 SKA2P1-201ENST00000425592 390 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 AL445669.1-201ENST00000426743 755 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 DNAJC19P4-201ENST00000440115 345 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 RPL23AP6-201ENST00000446637 472 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 AC002381.1-201ENST00000447049 280 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 ARPC3P5-201ENST00000448802 534 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 RNU7-136P-201ENST00000458819 69 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 AL163540.1-201ENST00000485382 386 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 AC092902.1-201ENST00000486999 259 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 RNU6-1225P-201ENST00000516336 65 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 RNU6-840P-201ENST00000517275 65 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 AC087897.1-201ENST00000550134 156 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 AL078605.1-201ENST00000603529 500 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 AC007038.2-201ENST00000608095 740 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 AL138478.1-201ENST00000612252 832 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 AC023158.2-201ENST00000614876 543 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 MIR7974-201ENST00000615835 79 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 CDC27P3-201ENST00000635418 1910 ntBASIC1.68□□□□□ -2.14
CCDC112Q8NEF3 RNU1-62P-201ENST00000362599 164 ntBASIC1.67□□□□□ -2.14
CCDC112Q8NEF3 RNU6-754P-201ENST00000391166 107 ntBASIC1.67□□□□□ -2.14
CCDC112Q8NEF3 RNU6-516P-201ENST00000411381 104 ntBASIC1.67□□□□□ -2.14
CCDC112Q8NEF3 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC112Q8NEF3 PTGES3P1-201ENST00000439531 483 ntBASIC1.67□□□□□ -2.14
CCDC112Q8NEF3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC112Q8NEF3 RPL18AP17-201ENST00000455326 198 ntBASIC1.67□□□□□ -2.14
CCDC112Q8NEF3 BX322784.1-201ENST00000455793 1077 ntBASIC1.67□□□□□ -2.14
CCDC112Q8NEF3 RNA5SP137-201ENST00000516833 135 ntBASIC1.67□□□□□ -2.14
CCDC112Q8NEF3 AC023825.1-201ENST00000566704 1030 ntBASIC1.67□□□□□ -2.14
CCDC112Q8NEF3 MIR8081-201ENST00000611533 95 ntBASIC1.67□□□□□ -2.14
CCDC112Q8NEF3 RNU6-778P-201ENST00000363269 103 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 CCNG1P1-201ENST00000406783 885 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AL158823.1-201ENST00000418441 478 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AL353729.1-201ENST00000425044 720 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 MRPS33P3-201ENST00000513456 322 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 RNU6-970P-201ENST00000516312 107 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AP003355.1-201ENST00000518956 587 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 DEFB130C-202ENST00000530001 230 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 ARL2BPP2-201ENST00000550907 489 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 MIR3912-201ENST00000577566 105 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AL353997.4-201ENST00000586196 166 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AC002545.1-201ENST00000592511 181 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AL031274.2-201ENST00000599419 203 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AL139344.1-201ENST00000605228 195 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AC069545.1-201ENST00000605671 358 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 BX248123.2-201ENST00000606318 124 ntBASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC112Q8NEF3 AC239868.4-201ENST00000608318 671 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms