Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
DTX3Q8N9I9 VN1R91P-201ENST00000594377 169 ntBASIC3.88□□□□□ -1.79
DTX3Q8N9I9 AL158827.2-201ENST00000602494 330 ntBASIC3.88□□□□□ -1.79
DTX3Q8N9I9 MTND4LP5-201ENST00000605152 292 ntBASIC3.88□□□□□ -1.79
DTX3Q8N9I9 AP002826.1-201ENST00000608835 315 ntBASIC3.88□□□□□ -1.79
DTX3Q8N9I9 MIR1244-1-201ENST00000612829 85 ntBASIC3.88□□□□□ -1.79
DTX3Q8N9I9 AC004852.3-201ENST00000614131 326 ntBASIC3.88□□□□□ -1.79
DTX3Q8N9I9 HMGB1P24-202ENST00000615653 685 ntBASIC3.88□□□□□ -1.79
DTX3Q8N9I9 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
DTX3Q8N9I9 AL691447.3-201ENST00000635020 330 ntBASIC3.88□□□□□ -1.79
DTX3Q8N9I9 MIR1244-3-201ENST00000635744 85 ntBASIC3.88□□□□□ -1.79
DTX3Q8N9I9 MIR1244-2-201ENST00000636449 85 ntBASIC3.88□□□□□ -1.79
DTX3Q8N9I9 MIR1244-4-202ENST00000636813 85 ntBASIC3.88□□□□□ -1.79
DTX3Q8N9I9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
DTX3Q8N9I9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
DTX3Q8N9I9 AL136964.1-201ENST00000622038 2990 ntBASIC3.88□□□□□ -1.79
DTX3Q8N9I9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
DTX3Q8N9I9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
DTX3Q8N9I9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
DTX3Q8N9I9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
DTX3Q8N9I9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 ZNF299P-201ENST00000406845 1804 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AC079741.1-201ENST00000321498 212 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 SNORD14B-201ENST00000364533 90 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 SNORA71.2-201ENST00000364941 134 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 U3.15-201ENST00000365398 212 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 RNU6-827P-201ENST00000365553 106 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 RNU6-1181P-201ENST00000384191 106 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AL022722.2-201ENST00000402519 180 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 MIR1290-201ENST00000408735 78 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 SNORD56-201ENST00000413522 71 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AL356968.1-201ENST00000416622 474 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 TOMM22P1-201ENST00000418578 312 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 NDUFB4P7-201ENST00000423198 363 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 RPL27AP8-201ENST00000424277 446 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AC017083.1-201ENST00000428093 483 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 DNAJC19P7-201ENST00000428811 344 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 NDUFB1P2-201ENST00000449477 176 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 snoU13.24-201ENST00000458998 104 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 HMGB1P22-201ENST00000505315 124 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 NDUFB4P9-201ENST00000511646 388 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 IGHV3-76-201ENST00000522465 295 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AL360157.1-201ENST00000565962 87 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 MIR4330-201ENST00000579077 105 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AC078899.3-201ENST00000599065 212 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AC087385.3-201ENST00000620477 187 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AC093908.1-201ENST00000623125 8092 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 AC116096.1-201ENST00000566804 2314 ntBASIC3.87□□□□□ -1.79
DTX3Q8N9I9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
DTX3Q8N9I9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.86□□□□□ -1.79
DTX3Q8N9I9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
DTX3Q8N9I9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
DTX3Q8N9I9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
DTX3Q8N9I9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
DTX3Q8N9I9 Y_RNA.276-201ENST00000364732 109 ntBASIC3.86□□□□□ -1.79
DTX3Q8N9I9 Y_RNA.461-201ENST00000384263 103 ntBASIC3.86□□□□□ -1.79
DTX3Q8N9I9 SNORA51.11-201ENST00000384442 131 ntBASIC3.86□□□□□ -1.79
DTX3Q8N9I9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
DTX3Q8N9I9 Y_RNA.623-201ENST00000411128 95 ntBASIC3.86□□□□□ -1.79
DTX3Q8N9I9 RPS20P14-201ENST00000412545 360 ntBASIC3.86□□□□□ -1.79
DTX3Q8N9I9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.86□□□□□ -1.79
DTX3Q8N9I9 RPS12P10-201ENST00000427031 377 ntBASIC3.86□□□□□ -1.79
DTX3Q8N9I9 AC092423.1-201ENST00000430165 186 ntBASIC3.86□□□□□ -1.79
DTX3Q8N9I9 AC087650.1-201ENST00000431445 468 ntBASIC3.86□□□□□ -1.79
DTX3Q8N9I9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.86□□□□□ -1.79
DTX3Q8N9I9 RN7SL738P-201ENST00000470264 297 ntBASIC3.86□□□□□ -1.79
DTX3Q8N9I9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.86□□□□□ -1.79
DTX3Q8N9I9 RPL21P13-201ENST00000488305 481 ntBASIC3.86□□□□□ -1.79
DTX3Q8N9I9 AC107222.1-201ENST00000510899 637 ntBASIC3.86□□□□□ -1.79
DTX3Q8N9I9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.86□□□□□ -1.79
DTX3Q8N9I9 AC004024.1-201ENST00000549244 247 ntBASIC3.86□□□□□ -1.79
DTX3Q8N9I9 HMGB1P14-201ENST00000557424 591 ntBASIC3.86□□□□□ -1.79
DTX3Q8N9I9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.86□□□□□ -1.79
DTX3Q8N9I9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.86□□□□□ -1.79
DTX3Q8N9I9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.86□□□□□ -1.79
DTX3Q8N9I9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.86□□□□□ -1.79
DTX3Q8N9I9 AC125232.2-201ENST00000592457 143 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms