Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 MIR3921-201ENST00000577308 85 ntBASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 SAMMSON-226ENST00000642089 1582 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 MAPK10-349ENST00000641767 3661 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 Z95331.1-201ENST00000623075 23112 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 RNU6-834P-201ENST00000362367 110 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 Y_RNA.101-201ENST00000363154 102 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 SNORD32A-201ENST00000364805 84 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 U3.19-201ENST00000390893 196 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 EBAG9P1-201ENST00000418955 543 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 RPL23AP95-201ENST00000426806 265 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 AL356867.1-201ENST00000429623 299 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 TBCAP1-201ENST00000436520 327 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 RPS29P10-201ENST00000439197 166 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 RPS20P10-201ENST00000451209 253 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 OR2AO1P-201ENST00000476497 403 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 AL132838.2-201ENST00000492041 314 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 RNA5SP291-201ENST00000517222 105 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 ZNF192P1-203ENST00000565888 810 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 MIR4660-201ENST00000583549 74 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 AL512624.1-201ENST00000613638 469 ntBASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC116Q8IYX3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
CCDC116Q8IYX3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CCDC116Q8IYX3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.9□□□□□ -1.62
CCDC116Q8IYX3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC116Q8IYX3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC116Q8IYX3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC116Q8IYX3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC116Q8IYX3 AC063976.2-201ENST00000425667 3556 ntBASIC4.9□□□□□ -1.62
CCDC116Q8IYX3 SNORD115-8-201ENST00000363856 82 ntBASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 SNORD115-38-201ENST00000365037 82 ntBASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 RPL27AP8-201ENST00000424277 446 ntBASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 AL358075.3-201ENST00000426289 226 ntBASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 AL451050.1-201ENST00000450126 415 ntBASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 RNU6-625P-201ENST00000459412 107 ntBASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 UBE2CP3-201ENST00000502715 450 ntBASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 IGKV2-18-201ENST00000522607 343 ntBASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 MIR4431-201ENST00000579990 94 ntBASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 DEFB117-201ENST00000602356 141 ntBASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 AC126915.2-201ENST00000610957 190 ntBASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 AC010999.1-201ENST00000611856 324 ntBASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC116Q8IYX3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 U3.3-201ENST00000362986 216 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 RNA5SP235-201ENST00000365411 114 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 MIR600-201ENST00000385007 98 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 COX5BP7-201ENST00000414780 274 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 AC074290.1-201ENST00000448883 135 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 AL121594.1-201ENST00000475906 575 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 PDCD5P2-201ENST00000507570 312 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 RNU4-57P-201ENST00000515980 135 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 RNU6-155P-201ENST00000516347 100 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 AC100767.1-201ENST00000528178 123 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 AC136624.4-201ENST00000573044 370 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 MIR4472-2-201ENST00000582069 67 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 DNAJC19P2-201ENST00000593340 302 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 AC105254.2-201ENST00000603636 436 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 AC090132.2-201ENST00000615881 347 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 AC118658.2-201ENST00000618697 459 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 AC024581.2-201ENST00000619986 252 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms