Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AC137499.1-201ENST00000427602 88 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 RPS24P1-201ENST00000438550 371 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.25□□□□□ -2.05
SKA3Q8IX90 PGBD4P3-201ENST00000440731 581 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.25□□□□□ -2.05
SKA3Q8IX90 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.25□□□□□ -2.05
SKA3Q8IX90 AL109933.2-201ENST00000452651 260 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.25□□□□□ -2.05
SKA3Q8IX90 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.25□□□□□ -2.05
SKA3Q8IX90 SRIP1-201ENST00000489235 288 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.25□□□□□ -2.05
SKA3Q8IX90 AC105252.1-201ENST00000503089 286 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 AC010486.3-201ENST00000511602 785 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.25□□□□□ -2.05
SKA3Q8IX90 AC243972.3-201ENST00000539655 198 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.25□□□□□ -2.05
SKA3Q8IX90 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.25□□□□□ -2.05
SKA3Q8IX90 AC010546.1-201ENST00000569391 485 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.25□□□□□ -2.05
SKA3Q8IX90 CLIC4P2-201ENST00000601934 717 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 Z99497.2-201ENST00000603634 310 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 AC104763.2-201ENST00000604179 382 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 AP002360.4-201ENST00000606980 481 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 AL365204.3-201ENST00000612448 685 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 AC108479.2-201ENST00000617314 601 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 MIR3974-201ENST00000637126 96 ntBASIC2.25□□□□□ -2.05
SKA3Q8IX90 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.25□□□□□ -2.05
SKA3Q8IX90 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SKA3Q8IX90 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SKA3Q8IX90 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SKA3Q8IX90 ZNF519P1-201ENST00000449011 1626 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 RNU6-778P-201ENST00000363269 103 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 U3.4-201ENST00000363352 213 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 SET-203ENST00000372688 801 ntTSL 2 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 RNU1-73P-201ENST00000383971 164 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 RNY3P9-201ENST00000384727 106 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 AL139039.1-201ENST00000401900 692 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SKA3Q8IX90 RNU2-8P-201ENST00000410727 190 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC080125.1-201ENST00000414888 684 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC009518.2-201ENST00000418056 731 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 AL591212.2-201ENST00000433923 257 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC104850.1-201ENST00000435940 476 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC126182.1-201ENST00000478134 357 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 RPS15AP34-201ENST00000487776 387 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 MRPS36P2-201ENST00000512569 299 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 RNU2-46P-201ENST00000517038 113 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 RNU6-1220P-201ENST00000517126 108 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 CKS1BP7-201ENST00000522230 235 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 MTND2P38-201ENST00000522536 667 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC022616.3-201ENST00000523940 148 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SKA3Q8IX90 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC090616.3-201ENST00000582184 217 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 AL645944.1-201ENST00000603857 493 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC022893.3-201ENST00000607665 437 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC073114.1-201ENST00000612027 490 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 DUSP12P1-201ENST00000612874 516 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC130324.3-201ENST00000614165 542 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC022079.1-201ENST00000621546 602 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 AC007998.5-201ENST00000622938 237 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 Z99571.1-201ENST00000636677 394 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 MTND5P42-201ENST00000637720 498 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SKA3Q8IX90 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.24□□□□□ -2.05
SKA3Q8IX90 CR848007.1-201ENST00000442354 1699 ntBASIC2.24□□□□□ -2.05
SKA3Q8IX90 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.23□□□□□ -2.05
SKA3Q8IX90 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SKA3Q8IX90 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.23□□□□□ -2.05
SKA3Q8IX90 U8.3-201ENST00000363321 132 ntBASIC2.23□□□□□ -2.05
SKA3Q8IX90 RNU6-960P-201ENST00000364056 120 ntBASIC2.23□□□□□ -2.05
SKA3Q8IX90 RNU6-658P-201ENST00000384606 106 ntBASIC2.23□□□□□ -2.05
SKA3Q8IX90 RPS3AP36-201ENST00000398190 775 ntBASIC2.23□□□□□ -2.05
SKA3Q8IX90 RN7SKP142-201ENST00000411236 328 ntBASIC2.23□□□□□ -2.05
SKA3Q8IX90 RPS12P24-201ENST00000412619 387 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms