Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC012213.3-201ENST00000577199 777 ntBASIC2.55□□□□□ -2
CCDC71Q8IV32 MIR3913-1-201ENST00000577744 102 ntBASIC2.55□□□□□ -2
CCDC71Q8IV32 AC098826.3-201ENST00000603823 466 ntBASIC2.55□□□□□ -2
CCDC71Q8IV32 FTX_3.1-201ENST00000610451 147 ntBASIC2.55□□□□□ -2
CCDC71Q8IV32 AC011939.3-201ENST00000613686 466 ntBASIC2.55□□□□□ -2
CCDC71Q8IV32 AC099842.1-201ENST00000619919 596 ntBASIC2.55□□□□□ -2
CCDC71Q8IV32 AL589994.2-201ENST00000621124 579 ntBASIC2.55□□□□□ -2
CCDC71Q8IV32 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.55□□□□□ -2
CCDC71Q8IV32 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.55□□□□□ -2
CCDC71Q8IV32 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC71Q8IV32 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC71Q8IV32 UBE2L2-201ENST00000254302 429 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 RNU4-82P-201ENST00000362443 140 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 Y_RNA.194-201ENST00000363985 102 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 RNU6-188P-201ENST00000364207 107 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CCDC71Q8IV32 RNU6-946P-201ENST00000383878 107 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.54□□□□□ -2
CCDC71Q8IV32 RNA5SP252-201ENST00000391131 119 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71Q8IV32 BTF3L4P3-201ENST00000418879 476 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AC016907.1-201ENST00000419483 435 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.54□□□□□ -2
CCDC71Q8IV32 ISCA1P1-201ENST00000426679 387 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AC104651.1-201ENST00000427559 735 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AL513043.1-201ENST00000439124 535 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.54□□□□□ -2
CCDC71Q8IV32 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71Q8IV32 NIPA2P5-201ENST00000452282 464 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 RNU6-953P-201ENST00000459154 107 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AC126389.1-201ENST00000477436 290 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 RPL39P36-201ENST00000490784 156 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71Q8IV32 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.54□□□□□ -2
CCDC71Q8IV32 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71Q8IV32 RN7SKP298-201ENST00000515950 94 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 SCARNA24.1-201ENST00000516465 137 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 RNA5SP471-201ENST00000516971 106 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 RNU6-430P-201ENST00000517078 107 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 RNU6-1220P-201ENST00000517126 108 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71Q8IV32 AP000867.2-201ENST00000532468 320 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC71Q8IV32 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71Q8IV32 HPRT1P3-201ENST00000539521 576 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AC004486.1-201ENST00000546846 233 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.54□□□□□ -2
CCDC71Q8IV32 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71Q8IV32 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71Q8IV32 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71Q8IV32 MTCYBP33-201ENST00000575007 1130 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.54□□□□□ -2
CCDC71Q8IV32 MIR98-201ENST00000606724 119 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AC013412.1-201ENST00000610687 192 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AL589743.7-201ENST00000612637 233 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AC005332.10-201ENST00000612725 619 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AC008498.1-201ENST00000613012 531 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AC002064.3-201ENST00000623448 346 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71Q8IV32 MTND5P42-201ENST00000637720 498 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.54□□□□□ -2
CCDC71Q8IV32 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC71Q8IV32 AC091564.4-201ENST00000533934 2194 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.54□□□□□ -2
CCDC71Q8IV32 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC71Q8IV32 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.54□□□□□ -2
CCDC71Q8IV32 AC138915.1-201ENST00000565427 1685 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC71Q8IV32 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.53□□□□□ -2
CCDC71Q8IV32 RNU6-799P-201ENST00000363567 107 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 MIR592-201ENST00000384959 97 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.53□□□□□ -2
CCDC71Q8IV32 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
CCDC71Q8IV32 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC71Q8IV32 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 RNU2-39P-201ENST00000410604 198 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 AL663109.1-201ENST00000411498 844 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 RPS12P24-201ENST00000412619 387 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.53□□□□□ -2
CCDC71Q8IV32 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.53□□□□□ -2
CCDC71Q8IV32 AC093106.2-201ENST00000428212 385 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 RPL31P35-201ENST00000431058 377 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.53□□□□□ -2
CCDC71Q8IV32 AC079781.2-201ENST00000446424 169 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 AC079448.1-201ENST00000449377 373 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.53□□□□□ -2
CCDC71Q8IV32 FABP5P15-201ENST00000453566 214 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 AP000705.1-201ENST00000454567 350 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 AL031183.1-201ENST00000457667 207 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 TPT1P7-201ENST00000458300 517 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 RPL37P6-201ENST00000460682 294 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 AP000852.1-201ENST00000472460 573 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 AC090525.1-201ENST00000479116 478 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.53□□□□□ -2
CCDC71Q8IV32 MTCO3P7-201ENST00000510008 774 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 AC114781.4-201ENST00000513707 639 ntBASIC2.53□□□□□ -2
CCDC71Q8IV32 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC71Q8IV32 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.53□□□□□ -2
CCDC71Q8IV32 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.53□□□□□ -2
CCDC71Q8IV32 AC068790.2-201ENST00000602601 557 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms