Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP48Q86UV5 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.78□□□□□ -1.64
USP48Q86UV5 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.78□□□□□ -1.64
USP48Q86UV5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.78□□□□□ -1.64
USP48Q86UV5 LRRC37A5P-203ENST00000580181 585 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 AC091167.4-201ENST00000605079 184 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 U3.45-201ENST00000607547 219 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 AC005344.1-201ENST00000613391 459 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.78□□□□□ -1.64
USP48Q86UV5 ATP5A1P2-202ENST00000616464 443 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 MIR7975-201ENST00000619350 68 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.78□□□□□ -1.64
USP48Q86UV5 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP48Q86UV5 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.78□□□□□ -1.64
USP48Q86UV5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP48Q86UV5 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP48Q86UV5 AC007823.1-201ENST00000569932 1566 ntBASIC4.78□□□□□ -1.64
USP48Q86UV5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP48Q86UV5 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP48Q86UV5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
USP48Q86UV5 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.77□□□□□ -1.65
USP48Q86UV5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
USP48Q86UV5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
USP48Q86UV5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.77□□□□□ -1.65
USP48Q86UV5 Y_RNA.33-201ENST00000362591 102 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 SNORA31-201ENST00000362607 130 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 RNU6-1179P-201ENST00000384667 107 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 RNU6-954P-201ENST00000411355 107 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 AC007919.1-201ENST00000429380 217 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 VDAC1P3-201ENST00000434069 851 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.77□□□□□ -1.65
USP48Q86UV5 FABP5P15-201ENST00000453566 214 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.77□□□□□ -1.65
USP48Q86UV5 RNU7-138P-201ENST00000459479 64 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 RNA5SP290-201ENST00000517133 127 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 AC087369.1-201ENST00000520775 996 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 AP003122.3-201ENST00000526316 255 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 AC084851.1-201ENST00000529105 249 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 AC091516.1-201ENST00000549191 703 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 AC025423.5-201ENST00000550230 219 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 AC026371.1-201ENST00000551867 419 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 MIR5690-201ENST00000583739 73 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 AC016925.2-201ENST00000605108 242 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 HMGB1P50-201ENST00000605814 607 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 RMST_9.1-201ENST00000619945 193 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 uc_338.22-201ENST00000622722 187 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.77□□□□□ -1.65
USP48Q86UV5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
USP48Q86UV5 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP48Q86UV5 MTND5P16-201ENST00000460269 1703 ntBASIC4.77□□□□□ -1.65
USP48Q86UV5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP48Q86UV5 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.76□□□□□ -1.65
USP48Q86UV5 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
USP48Q86UV5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP48Q86UV5 Y_RNA.197-201ENST00000364004 102 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 Y_RNA.445-201ENST00000384168 102 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
USP48Q86UV5 RNU6-607P-201ENST00000411283 108 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
USP48Q86UV5 AC113618.1-201ENST00000416747 285 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 AL353621.1-201ENST00000418219 243 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 ATG3P1-201ENST00000419507 911 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.76□□□□□ -1.65
USP48Q86UV5 AL356535.1-201ENST00000440335 398 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 CYCSP32-201ENST00000440548 321 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.76□□□□□ -1.65
USP48Q86UV5 MRPS31P2-201ENST00000451581 518 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 SNRPGP5-201ENST00000456003 220 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.76□□□□□ -1.65
USP48Q86UV5 UBE2CP3-201ENST00000502715 450 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
USP48Q86UV5 RNU6-1137P-201ENST00000517073 99 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.76□□□□□ -1.65
USP48Q86UV5 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.76□□□□□ -1.65
USP48Q86UV5 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.76□□□□□ -1.65
USP48Q86UV5 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.76□□□□□ -1.65
USP48Q86UV5 AC100830.2-201ENST00000581636 240 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 AC005000.2-201ENST00000605468 310 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 AC019193.3-201ENST00000609144 554 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 SNORD39.4-201ENST00000620099 78 ntBASIC4.76□□□□□ -1.65
USP48Q86UV5 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.76□□□□□ -1.65
USP48Q86UV5 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.76□□□□□ -1.65
USP48Q86UV5 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP48Q86UV5 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.76□□□□□ -1.65
USP48Q86UV5 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP48Q86UV5 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USP48Q86UV5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.75□□□□□ -1.65
USP48Q86UV5 RNU6-1188P-201ENST00000363795 107 ntBASIC4.75□□□□□ -1.65
USP48Q86UV5 RNU6-1105P-201ENST00000384774 107 ntBASIC4.75□□□□□ -1.65
USP48Q86UV5 RNU6-308P-201ENST00000390957 107 ntBASIC4.75□□□□□ -1.65
USP48Q86UV5 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.75□□□□□ -1.65
USP48Q86UV5 AL158156.1-201ENST00000422509 473 ntBASIC4.75□□□□□ -1.65
USP48Q86UV5 RPL7P37-201ENST00000425095 738 ntBASIC4.75□□□□□ -1.65
USP48Q86UV5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.75□□□□□ -1.65
USP48Q86UV5 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.75□□□□□ -1.65
USP48Q86UV5 RPL7P28-201ENST00000437739 740 ntBASIC4.75□□□□□ -1.65
USP48Q86UV5 Y_RNA.653-201ENST00000459091 95 ntBASIC4.75□□□□□ -1.65
USP48Q86UV5 RPL21P104-201ENST00000464143 478 ntBASIC4.75□□□□□ -1.65
USP48Q86UV5 AC106707.2-201ENST00000484182 374 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms