Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 U4.6-201ENST00000621618 127 ntBASIC3.72□□□□□ -1.81
CCDC149Q6ZUS6 AC073308.1-201ENST00000623696 305 ntBASIC3.72□□□□□ -1.81
CCDC149Q6ZUS6 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC149Q6ZUS6 AC244205.2-202ENST00000635781 342 ntBASIC3.72□□□□□ -1.81
CCDC149Q6ZUS6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.72□□□□□ -1.81
CCDC149Q6ZUS6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CCDC149Q6ZUS6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC149Q6ZUS6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC149Q6ZUS6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CCDC149Q6ZUS6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.71□□□□□ -1.81
CCDC149Q6ZUS6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
CCDC149Q6ZUS6 AC004520.1-201ENST00000608362 1413 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 Y_RNA.399-201ENST00000383955 105 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 SNORA75B-201ENST00000384053 137 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 RNU6-434P-201ENST00000384376 107 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 RNU6-45P-201ENST00000384471 107 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 SNORD17-201ENST00000390930 237 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 SNORA16.2-201ENST00000390991 127 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 U3.26-201ENST00000391236 204 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 RPL21P90-201ENST00000415692 466 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 ARL5AP1-201ENST00000418991 388 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 ERLEC1P1-201ENST00000433806 578 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 HMGB1P31-201ENST00000437242 427 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 WASF1P1-201ENST00000447560 1131 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 HMGB3P8-201ENST00000449709 577 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 AC010099.1-201ENST00000455434 375 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 RPL21P99-201ENST00000480369 423 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 PRDX4P1-201ENST00000507189 574 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 AC008716.1-201ENST00000511084 513 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 AC112206.3-201ENST00000514578 389 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 AC025755.1-201ENST00000521306 278 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 AP000867.2-201ENST00000532468 320 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 AC060780.3-201ENST00000589464 80 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 AL355598.1-201ENST00000604169 202 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 AL035413.2-201ENST00000604801 525 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 RNU6-89P-201ENST00000606519 100 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 AC135507.2-201ENST00000612443 309 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 MIR7112-201ENST00000616126 65 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 AP003400.5-201ENST00000624827 617 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 MTND4P35-201ENST00000604257 1375 ntBASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC149Q6ZUS6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 MFSD8-233ENST00000641482 4860 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 RNU1-18P-201ENST00000363062 164 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 RNU6-778P-201ENST00000363269 103 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 RNU6-82P-201ENST00000363970 107 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 HMGN2P8-201ENST00000391458 268 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 FGF7P8-201ENST00000402994 292 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 RN7SKP111-201ENST00000410349 271 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 HMGN2P30-201ENST00000423237 256 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 NEK4P1-201ENST00000433383 879 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 AP001486.1-201ENST00000463339 476 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 HMGN2P13-201ENST00000476476 274 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 RPL21P13-201ENST00000488305 481 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 RNU6-703P-201ENST00000516946 107 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 CENPUP1-201ENST00000526649 1202 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 BNIP3P6-201ENST00000549284 499 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 AC078814.3-201ENST00000553036 491 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 MIR3186-201ENST00000577404 85 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 MIR4513-201ENST00000581077 86 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 MIR4325-201ENST00000583049 90 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 TNPO1P3-201ENST00000436471 2662 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 NCAPGP1-201ENST00000505112 1814 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 RPS4XP5-202ENST00000449995 1334 ntBASIC3.7□□□□□ -1.82
CCDC149Q6ZUS6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
CCDC149Q6ZUS6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CCDC149Q6ZUS6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC149Q6ZUS6 AC010680.1-201ENST00000590024 3590 ntBASIC3.69□□□□□ -1.82
CCDC149Q6ZUS6 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CCDC149Q6ZUS6 Y_RNA.157-201ENST00000363638 102 ntBASIC3.69□□□□□ -1.82
CCDC149Q6ZUS6 RNU6-884P-201ENST00000363889 107 ntBASIC3.69□□□□□ -1.82
CCDC149Q6ZUS6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CCDC149Q6ZUS6 SNORA40C-201ENST00000391285 128 ntBASIC3.69□□□□□ -1.82
CCDC149Q6ZUS6 U3.39-201ENST00000408569 239 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms