Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC080078.3-201ENST00000605407 463 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 SNORA51-201ENST00000606420 132 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 uc_338.1-201ENST00000612113 180 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 SNHG22-203ENST00000617833 660 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 AC103705.1-201ENST00000619013 241 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 SNORD39.4-201ENST00000620099 78 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 MIR6075-201ENST00000620782 95 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 AL049781.1-201ENST00000623195 3585 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 Y_RNA.31-201ENST00000362574 102 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 RNU6-1287P-201ENST00000362914 107 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 RNU6-254P-201ENST00000363377 107 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 SNORD113-7-201ENST00000363762 77 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 RNU6-805P-201ENST00000365643 106 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 RNU6-946P-201ENST00000383878 107 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 RNU6-1013P-201ENST00000384180 107 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 RNU6-1060P-201ENST00000384664 107 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 MIR449B-201ENST00000384995 97 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 RNU4-65P-201ENST00000410473 140 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 PMCHL1-202ENST00000423102 261 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AC005019.1-201ENST00000436455 431 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 MTCO3P45-201ENST00000443036 613 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 RPL32P28-201ENST00000443577 397 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 HMGN2P21-201ENST00000447764 270 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 SCARNA18-201ENST00000459004 134 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AC008481.1-201ENST00000463278 396 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AC010631.1-201ENST00000474150 156 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AC090096.1-201ENST00000489168 390 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 TRBVA-201ENST00000498804 316 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 FTH1P9-201ENST00000513251 355 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 RNU1-143P-201ENST00000516296 146 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 RNU6-256P-201ENST00000516747 97 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 RNU6-273P-201ENST00000516937 96 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 RNA5SP454-201ENST00000517231 127 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 MIR4444-1-201ENST00000581696 74 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 MIR4444-2-201ENST00000584390 74 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AC092747.3-201ENST00000603769 301 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 U3.45-201ENST00000607547 219 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 U1.23-201ENST00000610293 146 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 RNU1-68P-201ENST00000615382 146 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 MIR6130-201ENST00000619419 109 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 U1.39-201ENST00000621562 146 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 AF117829.1-206ENST00000621883 3802 ntBASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF549Q6P9A3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 MTCO1P12-201ENST00000414273 1543 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 RNA5SP383-201ENST00000362934 120 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 Y_RNA.135-201ENST00000363439 95 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 RNU6-1155P-201ENST00000363554 107 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 RNU6-387P-201ENST00000411331 105 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 RAC1P6-201ENST00000423911 575 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 FABP5P14-201ENST00000437273 393 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 MTND1P17-201ENST00000448961 204 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 SNRPGP5-201ENST00000456003 220 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AC130509.1-201ENST00000464158 433 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 RPL21P8-201ENST00000465083 535 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 RN7SL293P-201ENST00000481765 281 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 RN7SL432P-201ENST00000484057 298 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AC078817.1-201ENST00000492623 435 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 SNORA64.4-201ENST00000516632 81 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 RN7SKP289-201ENST00000517244 295 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AP003385.6-201ENST00000531603 374 ntBASIC3.25□□□□□ -1.89
ZNF549Q6P9A3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms