Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 RNU6-1069P-201ENST00000516612 133 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 AC087854.1-201ENST00000519706 414 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 AC022695.1-201ENST00000522089 237 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 AC090877.1-201ENST00000561418 344 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 MIR3922-201ENST00000585192 84 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 AC096577.2-201ENST00000611455 153 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 AC091953.5-201ENST00000622919 233 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 RNU6-266P-201ENST00000364225 107 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 Y_RNA.324-201ENST00000365165 102 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 RNU6-658P-201ENST00000384606 106 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 AL138878.1-201ENST00000405131 347 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 RNU2-3P-201ENST00000410144 191 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 NCOR1P3-201ENST00000420479 303 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 HMGB1P37-201ENST00000439613 609 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 USP9YP8-201ENST00000441913 500 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 AL671855.1-201ENST00000446875 1203 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 AC010099.1-201ENST00000455434 375 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 SNORA25.17-201ENST00000517184 124 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 AC107953.1-201ENST00000522216 297 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 AP000867.2-201ENST00000532468 320 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 AC005668.1-201ENST00000571142 476 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 AC104260.1-201ENST00000616660 539 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 PLCE1P1-201ENST00000622094 305 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 U6.105-201ENST00000637379 88 ntBASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CCDC144BQ3MJ40 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC144BQ3MJ40 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC144BQ3MJ40 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC144BQ3MJ40 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
CCDC144BQ3MJ40 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 RPS4XP5-202ENST00000449995 1334 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-525P-201ENST00000363685 104 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 SNORD14B-201ENST00000364533 90 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 CYCSP33-201ENST00000414485 327 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 AC002075.2-201ENST00000425207 252 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 AL365400.1-201ENST00000431854 640 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 RPS3AP12-201ENST00000443616 753 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 AP002884.2-201ENST00000471647 395 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 RN7SL293P-201ENST00000481765 281 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 TRBV12-2-201ENST00000489763 344 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 TBCAP3-201ENST00000512475 312 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 RNU4-49P-201ENST00000516080 140 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 RNU1-86P-201ENST00000516108 154 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 RNU1-107P-201ENST00000516617 154 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-1183P-201ENST00000517054 60 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 IGKV2-23-201ENST00000518729 323 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 LINC00933-203ENST00000559812 219 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 H3F3AP1-201ENST00000559984 334 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 AC087045.1-201ENST00000605856 382 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 AC002044.1-201ENST00000606707 158 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 AL357078.3-201ENST00000607528 618 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 U3.45-201ENST00000607547 219 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 AC004852.3-201ENST00000614131 326 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 AC099654.5-201ENST00000636479 350 ntBASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-254P-201ENST00000363377 107 ntBASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 MIR450B-201ENST00000401182 78 ntBASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 AL592148.1-201ENST00000413568 445 ntBASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 SKA2P1-201ENST00000425592 390 ntBASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 AC017083.1-201ENST00000428093 483 ntBASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-329P-201ENST00000459618 107 ntBASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC144BQ3MJ40 AL391261.3-201ENST00000557194 520 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms