| NDUFA9 | Q16795 | SCARNA17.1-201 | ENST00000516211 | 143 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | SCARNA17.2-201 | ENST00000516334 | 143 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | RNU6-703P-201 | ENST00000516946 | 107 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | RNA5SP337-201 | ENST00000517007 | 109 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | RNA5SP402-201 | ENST00000517148 | 110 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | RNU1-104P-201 | ENST00000517280 | 175 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | TRIQK-207 | ENST00000519069 | 598 nt | TSL 4 BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC011979.2-201 | ENST00000527568 | 352 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC022878.1-201 | ENST00000530684 | 149 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AP003122.4-201 | ENST00000530980 | 758 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC021269.2-201 | ENST00000532318 | 330 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC007368.1-201 | ENST00000536422 | 974 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC131274.4-201 | ENST00000577879 | 398 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC069061.2-202 | ENST00000580280 | 357 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC090616.3-201 | ENST00000582184 | 217 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | MIR4435-1-201 | ENST00000582552 | 80 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC096708.3-201 | ENST00000584226 | 559 nt | TSL 2 BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | BNIP3P9-201 | ENST00000603714 | 553 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AL355598.1-201 | ENST00000604169 | 202 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC092354.1-201 | ENST00000606057 | 376 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AL365204.3-201 | ENST00000612448 | 685 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | SCARNA17.4-201 | ENST00000614296 | 143 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | MIR7515-201 | ENST00000637837 | 67 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC093536.2-201 | ENST00000565257 | 1406 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | SENP7-206 | ENST00000394094 | 4703 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | BCHE-201 | ENST00000264381 | 2454 nt | APPRIS P1 TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC010889.1-201 | ENST00000566193 | 2666 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | MIR449A-201 | ENST00000362113 | 91 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | RNU4-82P-201 | ENST00000362443 | 140 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | RNU4-1-201 | ENST00000363925 | 141 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | RNU6-188P-201 | ENST00000364207 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | CRLS1-202 | ENST00000378868 | 994 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | MRPL42P2-201 | ENST00000403169 | 426 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AL513475.1-201 | ENST00000406602 | 315 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC016710.1-201 | ENST00000421326 | 466 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AL023581.1-201 | ENST00000423500 | 455 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | LINC01038-201 | ENST00000457858 | 428 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC109486.1-201 | ENST00000486833 | 374 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC234781.5-201 | ENST00000508429 | 271 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | RNU6-143P-201 | ENST00000516942 | 93 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | SPINK7-205 | ENST00000523535 | 299 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC109446.2-201 | ENST00000567872 | 497 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC135628.1-201 | ENST00000568867 | 534 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | MIR3915-201 | ENST00000578518 | 97 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | HMGN1P30-201 | ENST00000589286 | 268 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC112191.3-201 | ENST00000604371 | 277 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | CERS6-AS1-209 | ENST00000609766 | 642 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC007494.3-201 | ENST00000624660 | 743 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | MIR1291-201 | ENST00000627649 | 87 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | LINC01002-202 | ENST00000631412 | 459 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | MIR3199-2-201 | ENST00000636243 | 86 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | MTND5P42-201 | ENST00000637720 | 498 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | EBAG9-210 | ENST00000620557 | 2186 nt | APPRIS P1 TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | ZNF280D-204 | ENST00000558320 | 3666 nt | TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | Z82209.1-201 | ENST00000422141 | 2135 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | MTND4P35-201 | ENST00000604257 | 1375 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AP000568.1-201 | ENST00000282964 | 442 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | NACAP2-201 | ENST00000318548 | 624 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | RNU6-960P-201 | ENST00000364056 | 120 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | C20orf187-201 | ENST00000378252 | 446 nt | TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AKR1C1-201 | ENST00000380859 | 858 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | RNU6-946P-201 | ENST00000383878 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC004014.1-201 | ENST00000413406 | 538 nt | TSL 4 BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AL158840.1-201 | ENST00000414132 | 523 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC026355.1-201 | ENST00000423466 | 587 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC007283.2-201 | ENST00000424739 | 197 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AL589872.1-201 | ENST00000426602 | 288 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | RPL7P34-201 | ENST00000433316 | 712 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC119618.1-201 | ENST00000434191 | 222 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | MTATP6P7-201 | ENST00000453315 | 681 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC093899.1-201 | ENST00000457984 | 376 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC128713.1-201 | ENST00000471495 | 306 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | RN7SL636P-201 | ENST00000497504 | 294 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC026780.2-201 | ENST00000503489 | 730 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | LNX1-AS1-203 | ENST00000511989 | 488 nt | TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | SNHG6-202 | ENST00000520619 | 479 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | COX6CP5-201 | ENST00000527162 | 228 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC087241.2-201 | ENST00000535801 | 324 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC021739.1-201 | ENST00000559631 | 174 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC027176.1-201 | ENST00000560204 | 514 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | LINC01290-201 | ENST00000566787 | 502 nt | TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | MIR548AB-201 | ENST00000584917 | 84 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | TCF4-AS2-201 | ENST00000586467 | 445 nt | TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC012065.4-201 | ENST00000602445 | 679 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | COMMD6-213 | ENST00000626103 | 120 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | Z99571.1-201 | ENST00000636677 | 394 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC099654.13-201 | ENST00000639774 | 207 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | OR4C15-202 | ENST00000642128 | 951 nt | APPRIS P1 BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AC016717.2-201 | ENST00000609089 | 5141 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | SAMD9L-201 | ENST00000318238 | 7134 nt | APPRIS P1 TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | ENAM-201 | ENST00000396073 | 5679 nt | APPRIS P1 TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | CDK1-202 | ENST00000373809 | 1613 nt | TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AL137003.2-201 | ENST00000606924 | 2538 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | AK9-203 | ENST00000368948 | 2478 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | SMARCAD1-206 | ENST00000509418 | 2348 nt | TSL 2 BASIC | 2.28 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | MTND4P4-201 | ENST00000439033 | 1366 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | ADAM3A-203 | ENST00000461344 | 2157 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | SNORD56.2-201 | ENST00000363242 | 71 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | RNU6-461P-201 | ENST00000364195 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| NDUFA9 | Q16795 | SNORA67.1-201 | ENST00000364749 | 141 nt | BASIC | 2.28 | □□□□□ -2.04 | | |