Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SMARCB1Q12824 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.2□□□□□ -2.06
SMARCB1Q12824 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.2□□□□□ -2.06
SMARCB1Q12824 AL391261.3-201ENST00000557194 520 ntBASIC2.2□□□□□ -2.06
SMARCB1Q12824 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.2□□□□□ -2.06
SMARCB1Q12824 MIR3117-201ENST00000584034 78 ntBASIC2.2□□□□□ -2.06
SMARCB1Q12824 MIR3616-201ENST00000584070 92 ntBASIC2.2□□□□□ -2.06
SMARCB1Q12824 NRBF2P1-201ENST00000587407 859 ntBASIC2.2□□□□□ -2.06
SMARCB1Q12824 AC009090.3-201ENST00000616553 565 ntBASIC2.2□□□□□ -2.06
SMARCB1Q12824 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.2□□□□□ -2.06
SMARCB1Q12824 AC104010.1-201ENST00000616889 150 ntBASIC2.2□□□□□ -2.06
SMARCB1Q12824 AL031601.2-202ENST00000622650 282 ntBASIC2.2□□□□□ -2.06
SMARCB1Q12824 AC012640.5-201ENST00000623897 319 ntBASIC2.2□□□□□ -2.06
SMARCB1Q12824 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SMARCB1Q12824 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.2□□□□□ -2.06
SMARCB1Q12824 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.2□□□□□ -2.06
SMARCB1Q12824 KPNA2P1-201ENST00000458289 1591 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.19□□□□□ -2.06
SMARCB1Q12824 RNU6-1140P-201ENST00000410517 106 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 HMGB3P2-201ENST00000411913 584 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.19□□□□□ -2.06
SMARCB1Q12824 AC098614.2-201ENST00000426040 255 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 AL590383.1-201ENST00000428602 75 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.19□□□□□ -2.06
SMARCB1Q12824 HMGN2P3-201ENST00000433603 273 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 HMGN2P5-201ENST00000436882 273 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.19□□□□□ -2.06
SMARCB1Q12824 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SMARCB1Q12824 ELOCP30-201ENST00000447108 299 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 FDX1P2-201ENST00000450769 375 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 RPL12P25-201ENST00000455592 494 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 RNU7-59P-201ENST00000459101 61 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 AC090515.1-201ENST00000465295 476 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 RPL21P99-201ENST00000480369 423 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 RPS29P20-201ENST00000489592 171 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.19□□□□□ -2.06
SMARCB1Q12824 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.19□□□□□ -2.06
SMARCB1Q12824 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.19□□□□□ -2.06
SMARCB1Q12824 COX6CP5-201ENST00000527162 228 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
SMARCB1Q12824 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.19□□□□□ -2.06
SMARCB1Q12824 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.19□□□□□ -2.06
SMARCB1Q12824 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.19□□□□□ -2.06
SMARCB1Q12824 AL138976.2-201ENST00000563989 694 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.19□□□□□ -2.06
SMARCB1Q12824 AC098826.3-201ENST00000603823 466 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 AC004908.2-201ENST00000609090 574 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 AC087683.2-201ENST00000611384 326 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 AC009159.2-201ENST00000617603 606 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 AC073308.1-201ENST00000623696 305 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 PISRT1-201ENST00000626175 531 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 AP003399.1-201ENST00000637534 361 ntBASIC2.19□□□□□ -2.06
SMARCB1Q12824 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.19□□□□□ -2.06
SMARCB1Q12824 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SMARCB1Q12824 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
SMARCB1Q12824 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SMARCB1Q12824 AC002543.1-201ENST00000299783 1954 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 RNU6-223P-201ENST00000362830 107 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 RNU5A-8P-201ENST00000364102 114 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 RNU6-809P-201ENST00000384461 107 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 AC019129.1-201ENST00000403786 261 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.18□□□□□ -2.06
SMARCB1Q12824 RPL23AP39-201ENST00000415533 405 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.18□□□□□ -2.06
SMARCB1Q12824 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.18□□□□□ -2.06
SMARCB1Q12824 TIMM9P1-201ENST00000436122 256 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 EPS15P1-201ENST00000448836 336 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.18□□□□□ -2.06
SMARCB1Q12824 MTND4LP3-201ENST00000468320 276 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 EIF4EP3-201ENST00000498782 656 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.18□□□□□ -2.06
SMARCB1Q12824 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.18□□□□□ -2.06
SMARCB1Q12824 RNU6-390P-201ENST00000516259 103 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 Y_RNA.717-201ENST00000517106 92 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 CYCSP26-201ENST00000534107 320 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.18□□□□□ -2.06
SMARCB1Q12824 AL356432.3-201ENST00000568952 465 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.18□□□□□ -2.06
SMARCB1Q12824 MIR4448-201ENST00000584360 86 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 HMGN2P15-201ENST00000585707 270 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 AC005498.1-201ENST00000592125 465 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 AC002545.1-201ENST00000592511 181 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 Z99289.3-201ENST00000605586 594 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 HMGB1P24-202ENST00000615653 685 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.18□□□□□ -2.06
SMARCB1Q12824 MIR7843-201ENST00000622274 79 ntBASIC2.18□□□□□ -2.06
SMARCB1Q12824 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SMARCB1Q12824 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.17□□□□□ -2.06
SMARCB1Q12824 ZNF720P1-201ENST00000562403 1939 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
SMARCB1Q12824 RNU5F-6P-201ENST00000362979 116 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 RN7SKP226-201ENST00000364912 300 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.17□□□□□ -2.06
SMARCB1Q12824 RNU6-140P-201ENST00000384566 108 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 GSTA9P-201ENST00000406231 611 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.17□□□□□ -2.06
SMARCB1Q12824 GTF2IP20-201ENST00000431663 360 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms