Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RPL7P43-201ENST00000478876 753 ntBASIC3.18□□□□□ -1.9
LTBQ06643 Y_RNA.654-201ENST00000497848 106 ntBASIC3.18□□□□□ -1.9
LTBQ06643 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.18□□□□□ -1.9
LTBQ06643 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.18□□□□□ -1.9
LTBQ06643 RNU2-27P-201ENST00000516185 142 ntBASIC3.18□□□□□ -1.9
LTBQ06643 SNORA25.17-201ENST00000517184 124 ntBASIC3.18□□□□□ -1.9
LTBQ06643 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.18□□□□□ -1.9
LTBQ06643 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.18□□□□□ -1.9
LTBQ06643 AF038458.1-201ENST00000588406 262 ntBASIC3.18□□□□□ -1.9
LTBQ06643 AC067852.3-201ENST00000589177 561 ntBASIC3.18□□□□□ -1.9
LTBQ06643 SNRPGP15-201ENST00000600149 222 ntBASIC3.18□□□□□ -1.9
LTBQ06643 AL627309.6-201ENST00000606857 840 ntBASIC3.18□□□□□ -1.9
LTBQ06643 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.18□□□□□ -1.9
LTBQ06643 AC110801.1-201ENST00000623590 212 ntBASIC3.18□□□□□ -1.9
LTBQ06643 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LTBQ06643 DDX10P1-201ENST00000448545 1933 ntBASIC3.18□□□□□ -1.9
LTBQ06643 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LTBQ06643 TPTE2P4-201ENST00000258589 1605 ntBASIC3.18□□□□□ -1.9
LTBQ06643 AP001350.1-201ENST00000601906 1524 ntBASIC3.18□□□□□ -1.9
LTBQ06643 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LTBQ06643 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
LTBQ06643 AL049781.1-201ENST00000623195 3585 ntBASIC3.17□□□□□ -1.9
LTBQ06643 USP8P1-201ENST00000494673 3183 ntBASIC3.17□□□□□ -1.9
LTBQ06643 OTUD4P1-201ENST00000237841 3067 ntBASIC3.17□□□□□ -1.9
LTBQ06643 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LTBQ06643 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.17□□□□□ -1.9
LTBQ06643 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LTBQ06643 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LTBQ06643 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LTBQ06643 RNU6-474P-201ENST00000384243 107 ntBASIC3.17□□□□□ -1.9
LTBQ06643 SNORD116-29-201ENST00000384516 83 ntBASIC3.17□□□□□ -1.9
LTBQ06643 AL592114.1-201ENST00000403842 483 ntBASIC3.17□□□□□ -1.9
LTBQ06643 MIR548K-201ENST00000408406 116 ntBASIC3.17□□□□□ -1.9
LTBQ06643 MIR548F5-201ENST00000408421 86 ntBASIC3.17□□□□□ -1.9
LTBQ06643 RNU2-37P-201ENST00000410695 177 ntBASIC3.17□□□□□ -1.9
LTBQ06643 RNU6-1304P-201ENST00000411374 106 ntBASIC3.17□□□□□ -1.9
LTBQ06643 VN1R36P-201ENST00000414936 291 ntBASIC3.17□□□□□ -1.9
LTBQ06643 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.17□□□□□ -1.9
LTBQ06643 BX842559.1-201ENST00000419615 532 ntBASIC3.17□□□□□ -1.9
LTBQ06643 MTND2P23-201ENST00000422990 651 ntBASIC3.17□□□□□ -1.9
LTBQ06643 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.17□□□□□ -1.9
LTBQ06643 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.17□□□□□ -1.9
LTBQ06643 MTND4P19-201ENST00000446659 478 ntBASIC3.17□□□□□ -1.9
LTBQ06643 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.17□□□□□ -1.9
LTBQ06643 AC006539.3-201ENST00000454258 129 ntBASIC3.17□□□□□ -1.9
LTBQ06643 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.17□□□□□ -1.9
LTBQ06643 RPL9P32-201ENST00000464118 620 ntBASIC3.17□□□□□ -1.9
LTBQ06643 RN7SL594P-201ENST00000470590 287 ntBASIC3.17□□□□□ -1.9
LTBQ06643 RN7SL432P-201ENST00000484057 298 ntBASIC3.17□□□□□ -1.9
LTBQ06643 NDUFB4P9-201ENST00000511646 388 ntBASIC3.17□□□□□ -1.9
LTBQ06643 RNU6-559P-201ENST00000516151 98 ntBASIC3.17□□□□□ -1.9
LTBQ06643 RNU6-685P-201ENST00000517088 95 ntBASIC3.17□□□□□ -1.9
LTBQ06643 Y_RNA.718-201ENST00000517110 102 ntBASIC3.17□□□□□ -1.9
LTBQ06643 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.17□□□□□ -1.9
LTBQ06643 OR11H5P-201ENST00000554039 926 ntBASIC3.17□□□□□ -1.9
LTBQ06643 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.17□□□□□ -1.9
LTBQ06643 RPL23AP84-201ENST00000571193 464 ntBASIC3.17□□□□□ -1.9
LTBQ06643 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.17□□□□□ -1.9
LTBQ06643 LARP7P3-201ENST00000579888 337 ntBASIC3.17□□□□□ -1.9
LTBQ06643 MIR3672-201ENST00000584290 82 ntBASIC3.17□□□□□ -1.9
LTBQ06643 APOOP1-201ENST00000604695 592 ntBASIC3.17□□□□□ -1.9
LTBQ06643 AL133215.3-201ENST00000609801 448 ntBASIC3.17□□□□□ -1.9
LTBQ06643 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.17□□□□□ -1.9
LTBQ06643 AL355365.1-201ENST00000616480 294 ntBASIC3.17□□□□□ -1.9
LTBQ06643 MIR6130-201ENST00000619419 109 ntBASIC3.17□□□□□ -1.9
LTBQ06643 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.17□□□□□ -1.9
LTBQ06643 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.17□□□□□ -1.9
LTBQ06643 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LTBQ06643 AC121333.1-201ENST00000567488 2709 ntBASIC3.17□□□□□ -1.9
LTBQ06643 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.17□□□□□ -1.9
LTBQ06643 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.16□□□□□ -1.9
LTBQ06643 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LTBQ06643 Y_RNA.216-201ENST00000364205 93 ntBASIC3.16□□□□□ -1.9
LTBQ06643 SNORA23-201ENST00000365128 182 ntBASIC3.16□□□□□ -1.9
LTBQ06643 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.16□□□□□ -1.9
LTBQ06643 RNU6-1127P-201ENST00000384580 107 ntBASIC3.16□□□□□ -1.9
LTBQ06643 SNORA75.4-201ENST00000391278 119 ntBASIC3.16□□□□□ -1.9
LTBQ06643 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LTBQ06643 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LTBQ06643 AL583834.1-201ENST00000406943 343 ntBASIC3.16□□□□□ -1.9
LTBQ06643 RNU4-46P-201ENST00000410818 138 ntBASIC3.16□□□□□ -1.9
LTBQ06643 RNU6-55P-201ENST00000411092 107 ntBASIC3.16□□□□□ -1.9
LTBQ06643 RNU6-954P-201ENST00000411355 107 ntBASIC3.16□□□□□ -1.9
LTBQ06643 POLHP1-201ENST00000411806 470 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AL137014.1-201ENST00000420490 1226 ntBASIC3.16□□□□□ -1.9
LTBQ06643 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.16□□□□□ -1.9
LTBQ06643 RPL31P12-201ENST00000422587 358 ntBASIC3.16□□□□□ -1.9
LTBQ06643 RPL21P112-201ENST00000434403 463 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AC090774.1-201ENST00000435925 246 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AC005019.1-201ENST00000436455 431 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AC004866.2-201ENST00000438285 481 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.16□□□□□ -1.9
LTBQ06643 BRK1P2-201ENST00000442875 223 ntBASIC3.16□□□□□ -1.9
LTBQ06643 U3.44-201ENST00000458938 192 ntBASIC3.16□□□□□ -1.9
LTBQ06643 SCARNA18-201ENST00000459004 134 ntBASIC3.16□□□□□ -1.9
LTBQ06643 RPL21P8-201ENST00000465083 535 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AC012181.1-201ENST00000479895 423 ntBASIC3.16□□□□□ -1.9
LTBQ06643 AC092451.1-201ENST00000480211 153 ntBASIC3.16□□□□□ -1.9
LTBQ06643 RPL23AP55-201ENST00000498163 452 ntBASIC3.16□□□□□ -1.9
LTBQ06643 KLHL2P1-201ENST00000508691 521 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms