Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PMS1P54277 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PMS1P54277 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.38□□□□□ -1.71
PMS1P54277 AP001486.2-201ENST00000561652 5113 ntBASIC4.37□□□□□ -1.71
PMS1P54277 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.37□□□□□ -1.71
PMS1P54277 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PMS1P54277 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.37□□□□□ -1.71
PMS1P54277 UBE3AP2-201ENST00000429033 2259 ntBASIC4.37□□□□□ -1.71
PMS1P54277 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PMS1P54277 Y_RNA.645-201ENST00000391229 102 ntBASIC4.37□□□□□ -1.71
PMS1P54277 RNU6-101P-201ENST00000410323 104 ntBASIC4.37□□□□□ -1.71
PMS1P54277 AC016397.1-201ENST00000412463 242 ntBASIC4.37□□□□□ -1.71
PMS1P54277 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.37□□□□□ -1.71
PMS1P54277 DPH3P2-201ENST00000422618 250 ntBASIC4.37□□□□□ -1.71
PMS1P54277 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.37□□□□□ -1.71
PMS1P54277 MRPS18CP6-201ENST00000423587 223 ntBASIC4.37□□□□□ -1.71
PMS1P54277 AL590383.1-201ENST00000428602 75 ntBASIC4.37□□□□□ -1.71
PMS1P54277 AC006946.1-201ENST00000429106 328 ntBASIC4.37□□□□□ -1.71
PMS1P54277 AC069499.1-201ENST00000489433 509 ntBASIC4.37□□□□□ -1.71
PMS1P54277 HMGN1P11-201ENST00000508668 303 ntBASIC4.37□□□□□ -1.71
PMS1P54277 SNORA31.8-201ENST00000516327 108 ntBASIC4.37□□□□□ -1.71
PMS1P54277 RNA5SP291-201ENST00000517222 105 ntBASIC4.37□□□□□ -1.71
PMS1P54277 AC007991.1-201ENST00000522680 631 ntBASIC4.37□□□□□ -1.71
PMS1P54277 YPEL5P3-201ENST00000547227 352 ntBASIC4.37□□□□□ -1.71
PMS1P54277 TRAV32-201ENST00000553993 340 ntBASIC4.37□□□□□ -1.71
PMS1P54277 AC025884.1-201ENST00000556034 378 ntBASIC4.37□□□□□ -1.71
PMS1P54277 U4.1-201ENST00000620349 87 ntBASIC4.37□□□□□ -1.71
PMS1P54277 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
PMS1P54277 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.37□□□□□ -1.71
PMS1P54277 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PMS1P54277 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
PMS1P54277 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PMS1P54277 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.36□□□□□ -1.71
PMS1P54277 AC015813.6-201ENST00000624409 5808 ntBASIC4.36□□□□□ -1.71
PMS1P54277 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-37P-201ENST00000362692 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-11P-201ENST00000364234 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-7-201ENST00000364784 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 Y_RNA.314-201ENST00000365114 102 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-8-201ENST00000365467 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-25P-201ENST00000383873 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-1-201ENST00000383898 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-48P-201ENST00000384161 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-36P-201ENST00000384172 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-4P-201ENST00000384205 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-5P-201ENST00000384238 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-3P-201ENST00000384314 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-16P-201ENST00000384385 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-15P-201ENST00000384534 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-2-201ENST00000384627 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-29P-201ENST00000384637 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-9-201ENST00000384776 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-33P-201ENST00000384793 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-174P-201ENST00000410406 106 ntBASIC4.36□□□□□ -1.71
PMS1P54277 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PMS1P54277 AL096701.2-201ENST00000416920 238 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.36□□□□□ -1.71
PMS1P54277 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.36□□□□□ -1.71
PMS1P54277 TOMM20P4-201ENST00000427861 435 ntBASIC4.36□□□□□ -1.71
PMS1P54277 AL353997.1-201ENST00000432936 108 ntBASIC4.36□□□□□ -1.71
PMS1P54277 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.36□□□□□ -1.71
PMS1P54277 AL031274.1-201ENST00000450334 232 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-1037P-201ENST00000459571 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RPL17P19-201ENST00000489069 552 ntBASIC4.36□□□□□ -1.71
PMS1P54277 FTH1P9-201ENST00000513251 355 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-475P-201ENST00000516073 104 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNA5SP309-201ENST00000516670 106 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-1073P-201ENST00000517182 106 ntBASIC4.36□□□□□ -1.71
PMS1P54277 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.36□□□□□ -1.71
PMS1P54277 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.36□□□□□ -1.71
PMS1P54277 AL161670.1-201ENST00000554348 137 ntBASIC4.36□□□□□ -1.71
PMS1P54277 HSBP1P1-201ENST00000555205 166 ntBASIC4.36□□□□□ -1.71
PMS1P54277 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.36□□□□□ -1.71
PMS1P54277 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.36□□□□□ -1.71
PMS1P54277 RNU6-6P-201ENST00000606623 107 ntBASIC4.36□□□□□ -1.71
PMS1P54277 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.36□□□□□ -1.71
PMS1P54277 AL606534.2-204ENST00000635008 178 ntBASIC4.36□□□□□ -1.71
PMS1P54277 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PMS1P54277 AC091812.1-201ENST00000432235 1948 ntBASIC4.36□□□□□ -1.71
PMS1P54277 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.36□□□□□ -1.71
PMS1P54277 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
PMS1P54277 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PMS1P54277 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PMS1P54277 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.35□□□□□ -1.71
PMS1P54277 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PMS1P54277 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.35□□□□□ -1.71
PMS1P54277 AC116096.1-201ENST00000566804 2314 ntBASIC4.35□□□□□ -1.71
PMS1P54277 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.35□□□□□ -1.71
PMS1P54277 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PMS1P54277 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PMS1P54277 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
PMS1P54277 Y_RNA.193-201ENST00000363979 102 ntBASIC4.35□□□□□ -1.71
PMS1P54277 RNU6-384P-201ENST00000364900 104 ntBASIC4.35□□□□□ -1.71
PMS1P54277 RNU6-741P-201ENST00000383889 107 ntBASIC4.35□□□□□ -1.71
PMS1P54277 RNU6-505P-201ENST00000384427 107 ntBASIC4.35□□□□□ -1.71
PMS1P54277 AL513475.1-201ENST00000406602 315 ntBASIC4.35□□□□□ -1.71
PMS1P54277 MIR1251-201ENST00000408552 70 ntBASIC4.35□□□□□ -1.71
PMS1P54277 RNU2-33P-201ENST00000410344 192 ntBASIC4.35□□□□□ -1.71
PMS1P54277 AL592148.1-201ENST00000413568 445 ntBASIC4.35□□□□□ -1.71
PMS1P54277 HMGB1P37-201ENST00000439613 609 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms