Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL391813.2-201ENST00000609113 322 ntBASIC2.78□□□□□ -1.96
LIMK2P53671 AC245517.5-201ENST00000611529 162 ntBASIC2.78□□□□□ -1.96
LIMK2P53671 AC090970.3-201ENST00000612566 866 ntBASIC2.78□□□□□ -1.96
LIMK2P53671 AL158209.2-201ENST00000619266 216 ntBASIC2.78□□□□□ -1.96
LIMK2P53671 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.78□□□□□ -1.96
LIMK2P53671 CR381653.2-201ENST00000624041 768 ntBASIC2.78□□□□□ -1.96
LIMK2P53671 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.78□□□□□ -1.96
LIMK2P53671 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LIMK2P53671 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.78□□□□□ -1.96
LIMK2P53671 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
LIMK2P53671 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.77□□□□□ -1.97
LIMK2P53671 AL161431.1-201ENST00000618966 4205 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 RNU6-270P-201ENST00000364131 105 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
LIMK2P53671 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.77□□□□□ -1.97
LIMK2P53671 RNU6-1027P-201ENST00000383998 107 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 AL359634.1-202ENST00000404721 284 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 GSTA9P-201ENST00000406231 611 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 RNU2-33P-201ENST00000410344 192 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.77□□□□□ -1.97
LIMK2P53671 USP9YP18-201ENST00000425912 695 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.77□□□□□ -1.97
LIMK2P53671 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.77□□□□□ -1.97
LIMK2P53671 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.77□□□□□ -1.97
LIMK2P53671 TIMM9P1-201ENST00000436122 256 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 AL451074.3-201ENST00000437709 472 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 PIGFP3-201ENST00000441918 722 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 AC020550.1-201ENST00000447385 163 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 AL121769.1-201ENST00000469473 401 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
LIMK2P53671 RBM43P1-201ENST00000476891 1081 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 RNU6-1178P-201ENST00000516674 107 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 RNU6-928P-201ENST00000516876 104 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.77□□□□□ -1.97
LIMK2P53671 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.77□□□□□ -1.97
LIMK2P53671 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.77□□□□□ -1.97
LIMK2P53671 AC234778.2-201ENST00000566241 354 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 NRBF2P1-201ENST00000587407 859 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 KC877982.1-201ENST00000602313 470 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 DUXAP4-201ENST00000603046 613 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 AP000860.1-201ENST00000605250 559 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 MTND1P37-201ENST00000636562 264 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 AC010149.2-201ENST00000637608 315 ntBASIC2.77□□□□□ -1.97
LIMK2P53671 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.77□□□□□ -1.97
LIMK2P53671 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LIMK2P53671 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
LIMK2P53671 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.76□□□□□ -1.97
LIMK2P53671 AC062016.1-201ENST00000355719 319 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 Y_RNA.296-201ENST00000364930 108 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
LIMK2P53671 MTND4LP11-201ENST00000422184 280 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 NUP35P1-201ENST00000422734 947 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.76□□□□□ -1.97
LIMK2P53671 RPL31P35-201ENST00000431058 377 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 AL596276.1-201ENST00000434465 418 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 PSPHP1-201ENST00000450062 261 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.76□□□□□ -1.97
LIMK2P53671 AC013267.1-201ENST00000458227 267 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 MTCO3P38-201ENST00000468910 766 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.76□□□□□ -1.97
LIMK2P53671 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.76□□□□□ -1.97
LIMK2P53671 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.76□□□□□ -1.97
LIMK2P53671 ELOCP31-201ENST00000540463 467 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.76□□□□□ -1.97
LIMK2P53671 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.76□□□□□ -1.97
LIMK2P53671 AC092325.1-201ENST00000566449 554 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 MIR3118-1-201ENST00000581787 76 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.76□□□□□ -1.97
LIMK2P53671 MIR4293-201ENST00000584305 78 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.76□□□□□ -1.97
LIMK2P53671 AL627309.6-201ENST00000606857 840 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 BX664608.1-201ENST00000610519 487 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.76□□□□□ -1.97
LIMK2P53671 AC073534.2-201ENST00000620377 381 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 AC090617.7-201ENST00000623952 126 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.76□□□□□ -1.97
LIMK2P53671 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.76□□□□□ -1.97
LIMK2P53671 MIR6863-201ENST00000636112 90 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
LIMK2P53671 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LIMK2P53671 ELF2P3-201ENST00000445099 1506 ntBASIC2.76□□□□□ -1.97
LIMK2P53671 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
LIMK2P53671 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LIMK2P53671 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LIMK2P53671 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.75□□□□□ -1.97
LIMK2P53671 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LIMK2P53671 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.75□□□□□ -1.97
LIMK2P53671 RNU6-1284P-201ENST00000363701 100 ntBASIC2.75□□□□□ -1.97
LIMK2P53671 RNU4-1-201ENST00000363925 141 ntBASIC2.75□□□□□ -1.97
LIMK2P53671 RNU6-198P-201ENST00000384258 104 ntBASIC2.75□□□□□ -1.97
LIMK2P53671 MTCO3P40-201ENST00000392516 676 ntBASIC2.75□□□□□ -1.97
LIMK2P53671 CALM2P3-201ENST00000400429 449 ntBASIC2.75□□□□□ -1.97
LIMK2P53671 BTF3P7-201ENST00000407097 488 ntBASIC2.75□□□□□ -1.97
LIMK2P53671 MTND3P17-201ENST00000416968 344 ntBASIC2.75□□□□□ -1.97
LIMK2P53671 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.75□□□□□ -1.97
LIMK2P53671 PIGFP2-201ENST00000421400 651 ntBASIC2.75□□□□□ -1.97
LIMK2P53671 AC019097.1-201ENST00000424783 735 ntBASIC2.75□□□□□ -1.97
LIMK2P53671 AC063976.3-201ENST00000426849 329 ntBASIC2.75□□□□□ -1.97
LIMK2P53671 AC007919.1-201ENST00000429380 217 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms