Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.59□□□□□ -1.99
SMSP52788 AC090616.3-201ENST00000582184 217 ntBASIC2.59□□□□□ -1.99
SMSP52788 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.59□□□□□ -1.99
SMSP52788 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.59□□□□□ -1.99
SMSP52788 AL603839.4-201ENST00000624658 1005 ntBASIC2.59□□□□□ -1.99
SMSP52788 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.59□□□□□ -1.99
SMSP52788 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.59□□□□□ -2
SMSP52788 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.59□□□□□ -2
SMSP52788 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.59□□□□□ -2
SMSP52788 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
SMSP52788 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SMSP52788 AC092447.7-201ENST00000422212 1621 ntBASIC2.58□□□□□ -2
SMSP52788 MIR26A1-201ENST00000362205 77 ntBASIC2.58□□□□□ -2
SMSP52788 RNU4-91P-201ENST00000364778 135 ntBASIC2.58□□□□□ -2
SMSP52788 RNU6-190P-201ENST00000384154 102 ntBASIC2.58□□□□□ -2
SMSP52788 AC080125.1-201ENST00000414888 684 ntBASIC2.58□□□□□ -2
SMSP52788 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.58□□□□□ -2
SMSP52788 MED13P1-201ENST00000428342 171 ntBASIC2.58□□□□□ -2
SMSP52788 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.58□□□□□ -2
SMSP52788 MTND6P13-201ENST00000443510 523 ntBASIC2.58□□□□□ -2
SMSP52788 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.58□□□□□ -2
SMSP52788 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.58□□□□□ -2
SMSP52788 AC093899.1-201ENST00000457984 376 ntBASIC2.58□□□□□ -2
SMSP52788 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.58□□□□□ -2
SMSP52788 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.58□□□□□ -2
SMSP52788 AC010486.2-201ENST00000505572 483 ntBASIC2.58□□□□□ -2
SMSP52788 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.58□□□□□ -2
SMSP52788 AC008716.1-201ENST00000511084 513 ntBASIC2.58□□□□□ -2
SMSP52788 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.58□□□□□ -2
SMSP52788 RNU6-1315P-201ENST00000517187 99 ntBASIC2.58□□□□□ -2
SMSP52788 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SMSP52788 HMGB1P41-201ENST00000520234 440 ntBASIC2.58□□□□□ -2
SMSP52788 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.58□□□□□ -2
SMSP52788 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.58□□□□□ -2
SMSP52788 MIR1273C-201ENST00000578669 77 ntBASIC2.58□□□□□ -2
SMSP52788 AC091152.3-201ENST00000604227 325 ntBASIC2.58□□□□□ -2
SMSP52788 MIR6134-201ENST00000617606 109 ntBASIC2.58□□□□□ -2
SMSP52788 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.58□□□□□ -2
SMSP52788 AL512643.1-201ENST00000635735 524 ntBASIC2.58□□□□□ -2
SMSP52788 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
SMSP52788 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SMSP52788 ADAM3A-203ENST00000461344 2157 ntBASIC2.58□□□□□ -2
SMSP52788 AC004520.1-201ENST00000608362 1413 ntBASIC2.58□□□□□ -2
SMSP52788 CDC27P3-201ENST00000635418 1910 ntBASIC2.58□□□□□ -2
SMSP52788 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
SMSP52788 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SMSP52788 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SMSP52788 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.57□□□□□ -2
SMSP52788 AC092593.1-201ENST00000515413 1815 ntBASIC2.57□□□□□ -2
SMSP52788 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.57□□□□□ -2
SMSP52788 VTRNA1-1-201ENST00000363120 99 ntBASIC2.57□□□□□ -2
SMSP52788 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.57□□□□□ -2
SMSP52788 MIR558-201ENST00000384920 94 ntBASIC2.57□□□□□ -2
SMSP52788 MIR592-201ENST00000384959 97 ntBASIC2.57□□□□□ -2
SMSP52788 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.57□□□□□ -2
SMSP52788 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.57□□□□□ -2
SMSP52788 RPS24P1-201ENST00000438550 371 ntBASIC2.57□□□□□ -2
SMSP52788 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.57□□□□□ -2
SMSP52788 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.57□□□□□ -2
SMSP52788 AL445687.1-201ENST00000439946 251 ntBASIC2.57□□□□□ -2
SMSP52788 AL161651.1-201ENST00000440882 223 ntBASIC2.57□□□□□ -2
SMSP52788 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.57□□□□□ -2
SMSP52788 NIPA2P5-201ENST00000452282 464 ntBASIC2.57□□□□□ -2
SMSP52788 AC233279.1-201ENST00000455300 423 ntBASIC2.57□□□□□ -2
SMSP52788 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.57□□□□□ -2
SMSP52788 SNORD109B-201ENST00000458961 67 ntBASIC2.57□□□□□ -2
SMSP52788 SNORD109A-201ENST00000459128 67 ntBASIC2.57□□□□□ -2
SMSP52788 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.57□□□□□ -2
SMSP52788 AC109329.2-201ENST00000519658 482 ntBASIC2.57□□□□□ -2
SMSP52788 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.57□□□□□ -2
SMSP52788 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.57□□□□□ -2
SMSP52788 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.57□□□□□ -2
SMSP52788 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.57□□□□□ -2
SMSP52788 CYCSP39-201ENST00000565821 309 ntBASIC2.57□□□□□ -2
SMSP52788 BNIP3P8-201ENST00000597863 560 ntBASIC2.57□□□□□ -2
SMSP52788 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.57□□□□□ -2
SMSP52788 uc_338.14-201ENST00000613162 166 ntBASIC2.57□□□□□ -2
SMSP52788 AL359757.2-201ENST00000624309 274 ntBASIC2.57□□□□□ -2
SMSP52788 AC007494.3-201ENST00000624660 743 ntBASIC2.57□□□□□ -2
SMSP52788 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.57□□□□□ -2
SMSP52788 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
SMSP52788 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
SMSP52788 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.57□□□□□ -2
SMSP52788 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMSP52788 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMSP52788 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMSP52788 SNORA4.3-201ENST00000365564 137 ntBASIC2.56□□□□□ -2
SMSP52788 Z98749.2-208ENST00000381646 500 ntBASIC2.56□□□□□ -2
SMSP52788 SNORA18.3-201ENST00000384122 132 ntBASIC2.56□□□□□ -2
SMSP52788 SNORA40C-201ENST00000391285 128 ntBASIC2.56□□□□□ -2
SMSP52788 RPS3AP36-201ENST00000398190 775 ntBASIC2.56□□□□□ -2
SMSP52788 RNU6-1328P-201ENST00000410938 106 ntBASIC2.56□□□□□ -2
SMSP52788 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.56□□□□□ -2
SMSP52788 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.56□□□□□ -2
SMSP52788 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.56□□□□□ -2
SMSP52788 AC093106.2-201ENST00000428212 385 ntBASIC2.56□□□□□ -2
SMSP52788 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.56□□□□□ -2
SMSP52788 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.56□□□□□ -2
SMSP52788 AC003982.1-202ENST00000469928 248 ntBASIC2.56□□□□□ -2
SMSP52788 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms