Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.71□□□□□ -2.14
COL18A1P39060 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL18A1P39060 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 SNORA67.1-201ENST00000364749 141 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 RNU6-754P-201ENST00000391166 107 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 DHFRP6-201ENST00000401776 268 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 TXNP7-201ENST00000406296 293 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 RPS12P24-201ENST00000412619 387 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 AL161449.1-201ENST00000414531 1199 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 MTND2P29-201ENST00000438595 412 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 RPL18AP17-201ENST00000455326 198 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.71□□□□□ -2.14
COL18A1P39060 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.71□□□□□ -2.14
COL18A1P39060 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.71□□□□□ -2.14
COL18A1P39060 MIR3117-201ENST00000584034 78 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 FAM106DP-201ENST00000586416 501 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 FTX_3.1-201ENST00000610451 147 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 AL512427.1-201ENST00000618593 349 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 AC126544.2-201ENST00000625174 749 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 DDX10P1-201ENST00000448545 1933 ntBASIC1.71□□□□□ -2.14
COL18A1P39060 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL18A1P39060 snoZ40.1-201ENST00000364540 72 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.7□□□□□ -2.14
COL18A1P39060 RNU6-637P-201ENST00000384050 107 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 U3.20-201ENST00000390909 217 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 AL513475.1-201ENST00000406602 315 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 TIMM9P2-201ENST00000419324 266 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.7□□□□□ -2.14
COL18A1P39060 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL18A1P39060 DDX3P2-201ENST00000446138 111 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 MRPS17P3-201ENST00000465453 385 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 MRPL42P6-201ENST00000486397 371 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.7□□□□□ -2.14
COL18A1P39060 MTND2P31-201ENST00000512602 616 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 RNU1-104P-201ENST00000517280 175 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
COL18A1P39060 SUB1P1-201ENST00000524415 382 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 AC109446.2-201ENST00000567872 497 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 AC126365.2-201ENST00000580630 379 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 AC009268.2-201ENST00000621925 457 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 AC116618.1-201ENST00000634617 774 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL18A1P39060 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL18A1P39060 Z82195.2-201ENST00000612348 18351 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 RNU6-223P-201ENST00000362830 107 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 RNU5E-8P-201ENST00000363502 116 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 RNU6-224P-201ENST00000384055 107 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 Y_RNA.578-201ENST00000390903 88 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 RNU6-952P-201ENST00000391164 108 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 TPMTP3-201ENST00000411928 735 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.7□□□□□ -2.14
COL18A1P39060 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.7□□□□□ -2.14
COL18A1P39060 Z82210.1-201ENST00000440037 231 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 AC097493.1-201ENST00000463958 372 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 AC114786.4-201ENST00000508771 728 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 AC006499.2-201ENST00000513470 337 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.7□□□□□ -2.14
COL18A1P39060 AC114797.1-201ENST00000514003 728 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 BTF3P12-201ENST00000519620 469 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.7□□□□□ -2.14
COL18A1P39060 MIR5194-201ENST00000582634 120 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.7□□□□□ -2.14
COL18A1P39060 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.7□□□□□ -2.14
COL18A1P39060 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.7□□□□□ -2.14
COL18A1P39060 AC097468.3-201ENST00000607956 456 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.7□□□□□ -2.14
COL18A1P39060 AC009237.15-201ENST00000610252 501 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 RNU6-1192P-201ENST00000612197 107 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 RNU6-489P-201ENST00000618289 107 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 AP003476.1-201ENST00000623984 516 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 MTND1P37-201ENST00000636562 264 ntBASIC1.7□□□□□ -2.14
COL18A1P39060 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
COL18A1P39060 SNORA38-201ENST00000363946 132 ntBASIC1.69□□□□□ -2.14
COL18A1P39060 RNU6-741P-201ENST00000383889 107 ntBASIC1.69□□□□□ -2.14
COL18A1P39060 RNU6-140P-201ENST00000384566 108 ntBASIC1.69□□□□□ -2.14
COL18A1P39060 MIR524-201ENST00000385242 87 ntBASIC1.69□□□□□ -2.14
COL18A1P39060 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.69□□□□□ -2.14
COL18A1P39060 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.69□□□□□ -2.14
COL18A1P39060 LARP1BP2-201ENST00000486594 519 ntBASIC1.69□□□□□ -2.14
COL18A1P39060 RPS3AP22-201ENST00000488297 769 ntBASIC1.69□□□□□ -2.14
COL18A1P39060 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.69□□□□□ -2.14
COL18A1P39060 AC005832.3-201ENST00000537929 631 ntBASIC1.69□□□□□ -2.14
COL18A1P39060 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.69□□□□□ -2.14
COL18A1P39060 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.69□□□□□ -2.14
COL18A1P39060 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.69□□□□□ -2.14
COL18A1P39060 AC019226.1-201ENST00000625666 515 ntBASIC1.69□□□□□ -2.14
COL18A1P39060 CCT4P2-201ENST00000233836 1548 ntBASIC1.69□□□□□ -2.14
COL18A1P39060 MIR520E-201ENST00000384867 87 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.68□□□□□ -2.14
COL18A1P39060 C1DP1-201ENST00000426049 402 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
COL18A1P39060 FGF7P5-201ENST00000441829 291 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.68□□□□□ -2.14
COL18A1P39060 OSTCP8-201ENST00000445117 448 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 AC002381.1-201ENST00000447049 280 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 TRGVB-201ENST00000453257 471 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms