Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.14□□□□□ -1.59
VARSP26640 AC024940.4-201ENST00000605507 246 ntBASIC5.14□□□□□ -1.59
VARSP26640 AC022441.3-201ENST00000605737 136 ntBASIC5.14□□□□□ -1.59
VARSP26640 AC004825.2-201ENST00000616634 455 ntBASIC5.14□□□□□ -1.59
VARSP26640 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.14□□□□□ -1.59
VARSP26640 MIR6839-201ENST00000620425 113 ntBASIC5.14□□□□□ -1.59
VARSP26640 AC008873.1-201ENST00000625051 138 ntBASIC5.14□□□□□ -1.59
VARSP26640 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.14□□□□□ -1.59
VARSP26640 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VARSP26640 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VARSP26640 AC099654.2-201ENST00000433031 1980 ntBASIC5.14□□□□□ -1.59
VARSP26640 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VARSP26640 AC112198.2-201ENST00000426589 6996 ntBASIC5.14□□□□□ -1.59
VARSP26640 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VARSP26640 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.14□□□□□ -1.59
VARSP26640 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
VARSP26640 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.13□□□□□ -1.59
VARSP26640 OR51H2P-202ENST00000641424 3046 ntBASIC5.13□□□□□ -1.59
VARSP26640 AC000123.3-201ENST00000624029 4975 ntBASIC5.13□□□□□ -1.59
VARSP26640 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
VARSP26640 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
VARSP26640 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.13□□□□□ -1.59
VARSP26640 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VARSP26640 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.13□□□□□ -1.59
VARSP26640 RNU4-11P-201ENST00000365287 132 ntBASIC5.13□□□□□ -1.59
VARSP26640 RNU6-356P-201ENST00000384140 107 ntBASIC5.13□□□□□ -1.59
VARSP26640 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VARSP26640 MIR513C-201ENST00000401352 84 ntBASIC5.13□□□□□ -1.59
VARSP26640 Y_RNA.625-201ENST00000411256 107 ntBASIC5.13□□□□□ -1.59
VARSP26640 TBCAP1-201ENST00000436520 327 ntBASIC5.13□□□□□ -1.59
VARSP26640 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.13□□□□□ -1.59
VARSP26640 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.13□□□□□ -1.59
VARSP26640 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.13□□□□□ -1.59
VARSP26640 SNRPCP2-201ENST00000504370 475 ntBASIC5.13□□□□□ -1.59
VARSP26640 PDCD5P2-201ENST00000507570 312 ntBASIC5.13□□□□□ -1.59
VARSP26640 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.13□□□□□ -1.59
VARSP26640 HMGB1P40-201ENST00000525121 540 ntBASIC5.13□□□□□ -1.59
VARSP26640 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.13□□□□□ -1.59
VARSP26640 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.13□□□□□ -1.59
VARSP26640 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.13□□□□□ -1.59
VARSP26640 RPL10P14-201ENST00000565265 298 ntBASIC5.13□□□□□ -1.59
VARSP26640 AC024614.2-201ENST00000577584 372 ntBASIC5.13□□□□□ -1.59
VARSP26640 MIR6748-201ENST00000610433 71 ntBASIC5.13□□□□□ -1.59
VARSP26640 AC126915.2-201ENST00000610957 190 ntBASIC5.13□□□□□ -1.59
VARSP26640 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.13□□□□□ -1.59
VARSP26640 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.13□□□□□ -1.59
VARSP26640 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VARSP26640 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VARSP26640 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
VARSP26640 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VARSP26640 AC126323.6-202ENST00000568092 3511 ntBASIC5.13□□□□□ -1.59
VARSP26640 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VARSP26640 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VARSP26640 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VARSP26640 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VARSP26640 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VARSP26640 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.12□□□□□ -1.59
VARSP26640 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VARSP26640 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.12□□□□□ -1.59
VARSP26640 SNORA63.4-201ENST00000362763 126 ntBASIC5.12□□□□□ -1.59
VARSP26640 SNORA72.2-201ENST00000365028 127 ntBASIC5.12□□□□□ -1.59
VARSP26640 SNORA29-201ENST00000384183 140 ntBASIC5.12□□□□□ -1.59
VARSP26640 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VARSP26640 RNU6-159P-201ENST00000391080 106 ntBASIC5.12□□□□□ -1.59
VARSP26640 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VARSP26640 AL035079.1-201ENST00000405210 287 ntBASIC5.12□□□□□ -1.59
VARSP26640 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.12□□□□□ -1.59
VARSP26640 RPL17P36-201ENST00000420302 549 ntBASIC5.12□□□□□ -1.59
VARSP26640 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VARSP26640 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.12□□□□□ -1.59
VARSP26640 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.12□□□□□ -1.59
VARSP26640 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.12□□□□□ -1.59
VARSP26640 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.12□□□□□ -1.59
VARSP26640 AC091874.1-201ENST00000511402 339 ntBASIC5.12□□□□□ -1.59
VARSP26640 RNA5SP373-201ENST00000517271 95 ntBASIC5.12□□□□□ -1.59
VARSP26640 DEFB131C-201ENST00000528817 165 ntBASIC5.12□□□□□ -1.59
VARSP26640 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VARSP26640 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.12□□□□□ -1.59
VARSP26640 AC126177.5-201ENST00000549599 178 ntBASIC5.12□□□□□ -1.59
VARSP26640 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.12□□□□□ -1.59
VARSP26640 SNORD84-203ENST00000584275 78 ntBASIC5.12□□□□□ -1.59
VARSP26640 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VARSP26640 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.12□□□□□ -1.59
VARSP26640 AP002799.1-201ENST00000623552 423 ntBASIC5.12□□□□□ -1.59
VARSP26640 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VARSP26640 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.12□□□□□ -1.59
VARSP26640 AC104623.2-202ENST00000623477 4002 ntBASIC5.12□□□□□ -1.59
VARSP26640 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.12□□□□□ -1.59
VARSP26640 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.12□□□□□ -1.59
VARSP26640 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VARSP26640 AC007390.2-201ENST00000606229 3803 ntBASIC5.12□□□□□ -1.59
VARSP26640 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VARSP26640 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VARSP26640 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VARSP26640 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VARSP26640 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VARSP26640 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.11□□□□□ -1.59
VARSP26640 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.11□□□□□ -1.59
VARSP26640 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VARSP26640 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms