Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RPL21P11-201ENST00000461458 483 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 RPL21P39-201ENST00000463605 483 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 RPL23AP45-201ENST00000476406 468 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 AC132942.1-201ENST00000486753 483 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 AC093591.1-201ENST00000491435 481 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 RPL21P16-201ENST00000495531 483 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 AL359273.1-201ENST00000510918 627 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 RNA5SP519-201ENST00000516480 119 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 Y_RNA.703-201ENST00000516846 111 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXD8P13378 AC007546.2-201ENST00000623996 360 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXD8P13378 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD8P13378 AC009812.4-201ENST00000569134 1805 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXD8P13378 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HOXD8P13378 HAUS6P2-201ENST00000433254 2404 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HOXD8P13378 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD8P13378 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXD8P13378 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD8P13378 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD8P13378 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXD8P13378 SPRR2C-201ENST00000290702 219 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 Y_RNA.405-201ENST00000383979 100 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 Y_RNA.451-201ENST00000384200 100 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 Y_RNA.524-201ENST00000384564 100 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 Y_RNA.561-201ENST00000384694 100 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 MIR10A-201ENST00000385043 110 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 RNA5SP44-201ENST00000410446 133 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 TMEM167AP1-201ENST00000423409 219 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD8P13378 RPS6P12-201ENST00000432491 726 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 RPL23AP81-201ENST00000455252 467 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 RNA5SP246-201ENST00000458909 119 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD8P13378 AL591473.1-201ENST00000464297 313 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 RPL35AP15-201ENST00000468042 339 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 AL132838.2-201ENST00000492041 314 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXD8P13378 RNU7-175P-201ENST00000515915 61 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 AL161713.1-201ENST00000555538 145 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 AC136932.1-201ENST00000574771 208 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 MIR4444-1-201ENST00000581696 74 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 MIR4444-2-201ENST00000584390 74 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 AL161798.1-201ENST00000604630 131 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 AL161629.2-201ENST00000615347 275 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD8P13378 AC091903.1-201ENST00000624322 454 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HOXD8P13378 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HOXD8P13378 AC090971.4-201ENST00000560291 1800 ntBASIC4.8□□□□□ -1.64
HOXD8P13378 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD8P13378 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HOXD8P13378 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD8P13378 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXD8P13378 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXD8P13378 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXD8P13378 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD8P13378 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD8P13378 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD8P13378 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD8P13378 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.79□□□□□ -1.64
HOXD8P13378 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HOXD8P13378 MIR372-201ENST00000362225 67 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 SNORD50.1-201ENST00000362987 71 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 RNU1-20P-201ENST00000363314 162 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 Y_RNA.199-201ENST00000364014 102 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 RNU6-384P-201ENST00000364900 104 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 RPS29P13-201ENST00000402041 169 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 RPS20P14-201ENST00000412545 360 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD8P13378 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXD8P13378 RPL36AP10-201ENST00000421785 322 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HOXD8P13378 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD8P13378 MLLT10P2-201ENST00000506434 249 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 RN7SKP272-201ENST00000516988 232 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 AC109479.2-201ENST00000517842 174 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXD8P13378 AP002392.1-201ENST00000537692 208 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD8P13378 TVP23BP1-201ENST00000557500 617 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD8P13378 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD8P13378 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 AL353748.2-201ENST00000622148 471 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD8P13378 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD8P13378 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HOXD8P13378 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD8P13378 ASNSP1-201ENST00000518311 1939 ntBASIC4.79□□□□□ -1.64
HOXD8P13378 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD8P13378 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD8P13378 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HOXD8P13378 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXD8P13378 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD8P13378 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
HOXD8P13378 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms