Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNU4-77P-201ENST00000516692 156 ntBASIC0.48□□□□□ -2.33
TOP2AP11388 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.48□□□□□ -2.33
TOP2AP11388 MTCO2P22-201ENST00000603246 681 ntBASIC0.48□□□□□ -2.33
TOP2AP11388 SDAD1P2-201ENST00000441308 2028 ntBASIC0.47□□□□□ -2.33
TOP2AP11388 RNU4-31P-201ENST00000384211 141 ntBASIC0.47□□□□□ -2.33
TOP2AP11388 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.47□□□□□ -2.33
TOP2AP11388 RNA5SP299-201ENST00000391203 116 ntBASIC0.47□□□□□ -2.33
TOP2AP11388 HMGB1P36-201ENST00000487709 576 ntBASIC0.47□□□□□ -2.33
TOP2AP11388 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
TOP2AP11388 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.47□□□□□ -2.33
TOP2AP11388 AL078605.1-201ENST00000603529 500 ntBASIC0.47□□□□□ -2.33
TOP2AP11388 MIR7515-201ENST00000637837 67 ntBASIC0.47□□□□□ -2.33
TOP2AP11388 AL391516.1-201ENST00000554380 2449 ntBASIC0.46□□□□□ -2.34
TOP2AP11388 SNORA8-201ENST00000384574 139 ntBASIC0.46□□□□□ -2.34
TOP2AP11388 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.46□□□□□ -2.34
TOP2AP11388 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.46□□□□□ -2.34
TOP2AP11388 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.46□□□□□ -2.34
TOP2AP11388 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.46□□□□□ -2.34
TOP2AP11388 RNA5SP404-201ENST00000517118 132 ntBASIC0.46□□□□□ -2.34
TOP2AP11388 HMGB3P31-201ENST00000413333 595 ntBASIC0.45□□□□□ -2.34
TOP2AP11388 AC091435.1-201ENST00000505442 584 ntBASIC0.45□□□□□ -2.34
TOP2AP11388 ACA64.5-201ENST00000516207 127 ntBASIC0.45□□□□□ -2.34
TOP2AP11388 RNA5SP285-201ENST00000516619 119 ntBASIC0.45□□□□□ -2.34
TOP2AP11388 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.45□□□□□ -2.34
TOP2AP11388 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.45□□□□□ -2.34
TOP2AP11388 AC074051.3-201ENST00000570238 358 ntBASIC0.45□□□□□ -2.34
TOP2AP11388 MIR4661-201ENST00000582720 75 ntBASIC0.45□□□□□ -2.34
TOP2AP11388 AC006213.5-201ENST00000619673 288 ntBASIC0.45□□□□□ -2.34
TOP2AP11388 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.45□□□□□ -2.34
TOP2AP11388 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.44□□□□□ -2.34
TOP2AP11388 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.44□□□□□ -2.34
TOP2AP11388 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.44□□□□□ -2.34
TOP2AP11388 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.44□□□□□ -2.34
TOP2AP11388 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.44□□□□□ -2.34
TOP2AP11388 APOOP3-201ENST00000536787 586 ntBASIC0.44□□□□□ -2.34
TOP2AP11388 MIR6130-201ENST00000619419 109 ntBASIC0.44□□□□□ -2.34
TOP2AP11388 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
TOP2AP11388 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.43□□□□□ -2.34
TOP2AP11388 AC004062.1-201ENST00000509926 645 ntBASIC0.43□□□□□ -2.34
TOP2AP11388 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.43□□□□□ -2.34
TOP2AP11388 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.43□□□□□ -2.34
TOP2AP11388 EEF1B2P4-201ENST00000551398 348 ntBASIC0.43□□□□□ -2.34
TOP2AP11388 AL355816.1-201ENST00000607951 118 ntBASIC0.43□□□□□ -2.34
TOP2AP11388 AC092192.1-201ENST00000633154 1018 ntBASIC0.43□□□□□ -2.34
TOP2AP11388 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.43□□□□□ -2.34
TOP2AP11388 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.43□□□□□ -2.34
TOP2AP11388 RPS27P22-201ENST00000478056 241 ntBASIC0.43□□□□□ -2.34
TOP2AP11388 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.43□□□□□ -2.34
TOP2AP11388 AL590705.4-201ENST00000532209 134 ntBASIC0.43□□□□□ -2.34
TOP2AP11388 AC005668.1-201ENST00000571142 476 ntBASIC0.43□□□□□ -2.34
TOP2AP11388 HSPE1P7-201ENST00000604681 321 ntBASIC0.43□□□□□ -2.34
TOP2AP11388 AC103710.4-201ENST00000609301 899 ntBASIC0.43□□□□□ -2.34
TOP2AP11388 AL590410.1-201ENST00000617925 333 ntBASIC0.43□□□□□ -2.34
TOP2AP11388 SNORA29-201ENST00000384183 140 ntBASIC0.42□□□□□ -2.34
TOP2AP11388 MIR32-201ENST00000384965 70 ntBASIC0.42□□□□□ -2.34
TOP2AP11388 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.42□□□□□ -2.34
TOP2AP11388 AL096803.2-201ENST00000450032 677 ntBASIC0.42□□□□□ -2.34
TOP2AP11388 snoU13.4-201ENST00000458916 104 ntBASIC0.42□□□□□ -2.34
TOP2AP11388 AL356585.4-201ENST00000623078 1229 ntBASIC0.42□□□□□ -2.34
TOP2AP11388 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.41□□□□□ -2.34
TOP2AP11388 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.41□□□□□ -2.34
TOP2AP11388 RPL7P29-201ENST00000437151 728 ntBASIC0.41□□□□□ -2.34
TOP2AP11388 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.41□□□□□ -2.34
TOP2AP11388 AC114786.4-201ENST00000508771 728 ntBASIC0.41□□□□□ -2.34
TOP2AP11388 PSMC1P5-201ENST00000512850 177 ntBASIC0.41□□□□□ -2.34
TOP2AP11388 AC114797.1-201ENST00000514003 728 ntBASIC0.41□□□□□ -2.34
TOP2AP11388 RNU7-40P-201ENST00000516397 64 ntBASIC0.41□□□□□ -2.34
TOP2AP11388 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.41□□□□□ -2.34
TOP2AP11388 RNA5SP105-201ENST00000391123 113 ntBASIC0.4□□□□□ -2.35
TOP2AP11388 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.4□□□□□ -2.35
TOP2AP11388 MTND4P6-201ENST00000438297 472 ntBASIC0.4□□□□□ -2.35
TOP2AP11388 SCARNA16.2-201ENST00000516520 172 ntBASIC0.4□□□□□ -2.35
TOP2AP11388 AC022254.1-201ENST00000567857 235 ntBASIC0.4□□□□□ -2.35
TOP2AP11388 VN1R82P-201ENST00000601481 356 ntBASIC0.4□□□□□ -2.35
TOP2AP11388 AC113194.1-201ENST00000606037 500 ntBASIC0.4□□□□□ -2.35
TOP2AP11388 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
TOP2AP11388 RNU6-115P-201ENST00000364310 107 ntBASIC0.39□□□□□ -2.35
TOP2AP11388 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
TOP2AP11388 RNU2-64P-201ENST00000411315 191 ntBASIC0.39□□□□□ -2.35
TOP2AP11388 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.39□□□□□ -2.35
TOP2AP11388 RSU1P2-202ENST00000437884 485 ntBASIC0.39□□□□□ -2.35
TOP2AP11388 ARPC3P5-201ENST00000448802 534 ntBASIC0.39□□□□□ -2.35
TOP2AP11388 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.39□□□□□ -2.35
TOP2AP11388 VN1R81P-201ENST00000602085 372 ntBASIC0.39□□□□□ -2.35
TOP2AP11388 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.39□□□□□ -2.35
TOP2AP11388 CUL4AP1-201ENST00000514750 1863 ntBASIC0.39□□□□□ -2.35
TOP2AP11388 AC138393.1-203ENST00000327086 343 ntBASIC0.38□□□□□ -2.35
TOP2AP11388 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.38□□□□□ -2.35
TOP2AP11388 AC145146.1-201ENST00000496370 254 ntBASIC0.38□□□□□ -2.35
TOP2AP11388 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.38□□□□□ -2.35
TOP2AP11388 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.38□□□□□ -2.35
TOP2AP11388 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.38□□□□□ -2.35
TOP2AP11388 MIR4636-201ENST00000582271 80 ntBASIC0.38□□□□□ -2.35
TOP2AP11388 XIAPP1-201ENST00000603162 600 ntBASIC0.38□□□□□ -2.35
TOP2AP11388 AC018755.4-201ENST00000619715 454 ntBASIC0.38□□□□□ -2.35
TOP2AP11388 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.38□□□□□ -2.35
TOP2AP11388 RPL7L1P10-201ENST00000427790 463 ntBASIC0.38□□□□□ -2.35
TOP2AP11388 RAP1BP2-201ENST00000478270 544 ntBASIC0.38□□□□□ -2.35
TOP2AP11388 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.38□□□□□ -2.35
TOP2AP11388 AL132857.1-201ENST00000555180 708 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms