Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AP003497.1-201ENST00000528472 562 ntBASIC2.48□□□□□ -2.01
TOP1P11387 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.48□□□□□ -2.01
TOP1P11387 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.48□□□□□ -2.01
TOP1P11387 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.48□□□□□ -2.01
TOP1P11387 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.48□□□□□ -2.01
TOP1P11387 BBIP1P1-201ENST00000602999 279 ntBASIC2.48□□□□□ -2.01
TOP1P11387 AC004223.4-201ENST00000612426 332 ntBASIC2.48□□□□□ -2.01
TOP1P11387 AL603755.1-201ENST00000619504 163 ntBASIC2.48□□□□□ -2.01
TOP1P11387 AC092192.1-201ENST00000633154 1018 ntBASIC2.48□□□□□ -2.01
TOP1P11387 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
TOP1P11387 MTND4P35-201ENST00000604257 1375 ntBASIC2.48□□□□□ -2.01
TOP1P11387 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TOP1P11387 RNU6-223P-201ENST00000362830 107 ntBASIC2.47□□□□□ -2.01
TOP1P11387 RNU6-289P-201ENST00000364093 107 ntBASIC2.47□□□□□ -2.01
TOP1P11387 Y_RNA.302-201ENST00000364997 102 ntBASIC2.47□□□□□ -2.01
TOP1P11387 RNU6-723P-201ENST00000383973 107 ntBASIC2.47□□□□□ -2.01
TOP1P11387 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.47□□□□□ -2.01
TOP1P11387 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.47□□□□□ -2.01
TOP1P11387 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.47□□□□□ -2.01
TOP1P11387 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.47□□□□□ -2.01
TOP1P11387 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.47□□□□□ -2.01
TOP1P11387 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.47□□□□□ -2.01
TOP1P11387 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.47□□□□□ -2.01
TOP1P11387 LARP1BP3-201ENST00000437229 869 ntBASIC2.47□□□□□ -2.01
TOP1P11387 MTATP6P26-201ENST00000445926 662 ntBASIC2.47□□□□□ -2.01
TOP1P11387 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.47□□□□□ -2.01
TOP1P11387 RPL23AP35-201ENST00000451906 501 ntBASIC2.47□□□□□ -2.01
TOP1P11387 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.47□□□□□ -2.01
TOP1P11387 BZW1P2-201ENST00000473537 826 ntBASIC2.47□□□□□ -2.01
TOP1P11387 HMGB1P36-201ENST00000487709 576 ntBASIC2.47□□□□□ -2.01
TOP1P11387 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.47□□□□□ -2.01
TOP1P11387 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
TOP1P11387 MTND1P22-201ENST00000510572 951 ntBASIC2.47□□□□□ -2.01
TOP1P11387 HSPE1P18-201ENST00000517602 280 ntBASIC2.47□□□□□ -2.01
TOP1P11387 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.47□□□□□ -2.01
TOP1P11387 OR6C7P-201ENST00000547875 934 ntBASIC2.47□□□□□ -2.01
TOP1P11387 AC121758.2-201ENST00000553271 193 ntBASIC2.47□□□□□ -2.01
TOP1P11387 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TOP1P11387 AC109446.2-201ENST00000567872 497 ntBASIC2.47□□□□□ -2.01
TOP1P11387 RPS3AP23-202ENST00000574601 686 ntBASIC2.47□□□□□ -2.01
TOP1P11387 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.47□□□□□ -2.01
TOP1P11387 WISP1-OT1-201ENST00000602893 642 ntBASIC2.47□□□□□ -2.01
TOP1P11387 AL391813.1-201ENST00000603098 260 ntBASIC2.47□□□□□ -2.01
TOP1P11387 SNORD14A-201ENST00000606526 91 ntBASIC2.47□□□□□ -2.01
TOP1P11387 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.47□□□□□ -2.01
TOP1P11387 AC122133.1-201ENST00000613964 233 ntBASIC2.47□□□□□ -2.01
TOP1P11387 AC078883.4-201ENST00000623218 367 ntBASIC2.47□□□□□ -2.01
TOP1P11387 AC012640.5-201ENST00000623897 319 ntBASIC2.47□□□□□ -2.01
TOP1P11387 AC099063.3-201ENST00000642066 185 ntBASIC2.47□□□□□ -2.01
TOP1P11387 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
TOP1P11387 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
TOP1P11387 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.46□□□□□ -2.02
TOP1P11387 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.46□□□□□ -2.02
TOP1P11387 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TOP1P11387 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
TOP1P11387 SNORA3A-201ENST00000364113 130 ntBASIC2.46□□□□□ -2.02
TOP1P11387 RNU6-660P-201ENST00000364566 109 ntBASIC2.46□□□□□ -2.02
TOP1P11387 RNU6-1207P-201ENST00000384343 107 ntBASIC2.46□□□□□ -2.02
TOP1P11387 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.46□□□□□ -2.02
TOP1P11387 BX119904.4-201ENST00000424402 301 ntBASIC2.46□□□□□ -2.02
TOP1P11387 RPL35AP22-201ENST00000436855 335 ntBASIC2.46□□□□□ -2.02
TOP1P11387 RPS27AP8-201ENST00000452665 445 ntBASIC2.46□□□□□ -2.02
TOP1P11387 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.46□□□□□ -2.02
TOP1P11387 AC080013.2-201ENST00000460866 323 ntBASIC2.46□□□□□ -2.02
TOP1P11387 RPL30P6-201ENST00000475925 342 ntBASIC2.46□□□□□ -2.02
TOP1P11387 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.46□□□□□ -2.02
TOP1P11387 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.46□□□□□ -2.02
TOP1P11387 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TOP1P11387 Y_RNA.688-201ENST00000516565 95 ntBASIC2.46□□□□□ -2.02
TOP1P11387 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
TOP1P11387 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.46□□□□□ -2.02
TOP1P11387 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.46□□□□□ -2.02
TOP1P11387 MIR3915-201ENST00000578518 97 ntBASIC2.46□□□□□ -2.02
TOP1P11387 MIR3199-1-201ENST00000582434 88 ntBASIC2.46□□□□□ -2.02
TOP1P11387 RNU6-88P-201ENST00000606801 100 ntBASIC2.46□□□□□ -2.02
TOP1P11387 AC004908.3-201ENST00000610248 625 ntBASIC2.46□□□□□ -2.02
TOP1P11387 SDR42E1P2-201ENST00000614861 481 ntBASIC2.46□□□□□ -2.02
TOP1P11387 AL356266.1-201ENST00000623311 483 ntBASIC2.46□□□□□ -2.02
TOP1P11387 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.45□□□□□ -2.02
TOP1P11387 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TOP1P11387 RNA5SP37-201ENST00000365420 130 ntBASIC2.45□□□□□ -2.02
TOP1P11387 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.45□□□□□ -2.02
TOP1P11387 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TOP1P11387 AL031577.2-201ENST00000404133 280 ntBASIC2.45□□□□□ -2.02
TOP1P11387 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.45□□□□□ -2.02
TOP1P11387 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.45□□□□□ -2.02
TOP1P11387 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.45□□□□□ -2.02
TOP1P11387 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.45□□□□□ -2.02
TOP1P11387 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.45□□□□□ -2.02
TOP1P11387 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.45□□□□□ -2.02
TOP1P11387 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.45□□□□□ -2.02
TOP1P11387 SNRPEP9-201ENST00000436794 238 ntBASIC2.45□□□□□ -2.02
TOP1P11387 IPO7P1-201ENST00000442031 636 ntBASIC2.45□□□□□ -2.02
TOP1P11387 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TOP1P11387 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.45□□□□□ -2.02
TOP1P11387 snoU13.15-201ENST00000459407 104 ntBASIC2.45□□□□□ -2.02
TOP1P11387 MTND3P7-201ENST00000474435 343 ntBASIC2.45□□□□□ -2.02
TOP1P11387 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.45□□□□□ -2.02
TOP1P11387 RPS27AP10-201ENST00000496103 208 ntBASIC2.45□□□□□ -2.02
TOP1P11387 AC093534.1-201ENST00000504977 132 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms