Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.13□□□□□ -1.91
LDLRP01130 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
LDLRP01130 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.13□□□□□ -1.91
LDLRP01130 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
LDLRP01130 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LDLRP01130 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LDLRP01130 RNU6-188P-201ENST00000364207 107 ntBASIC3.12□□□□□ -1.91
LDLRP01130 RNU6-877P-201ENST00000383868 107 ntBASIC3.12□□□□□ -1.91
LDLRP01130 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LDLRP01130 U3.42-201ENST00000408746 214 ntBASIC3.12□□□□□ -1.91
LDLRP01130 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.12□□□□□ -1.91
LDLRP01130 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.12□□□□□ -1.91
LDLRP01130 SNRPEP4-201ENST00000435815 279 ntBASIC3.12□□□□□ -1.91
LDLRP01130 AC009969.1-201ENST00000438726 172 ntBASIC3.12□□□□□ -1.91
LDLRP01130 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.12□□□□□ -1.91
LDLRP01130 AC007677.1-201ENST00000445757 515 ntBASIC3.12□□□□□ -1.91
LDLRP01130 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.12□□□□□ -1.91
LDLRP01130 RNU6-420P-201ENST00000458780 107 ntBASIC3.12□□□□□ -1.91
LDLRP01130 AC091179.1-201ENST00000461606 579 ntBASIC3.12□□□□□ -1.91
LDLRP01130 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.12□□□□□ -1.91
LDLRP01130 RPL21P13-201ENST00000488305 481 ntBASIC3.12□□□□□ -1.91
LDLRP01130 MTCO3P9-201ENST00000506989 781 ntBASIC3.12□□□□□ -1.91
LDLRP01130 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.12□□□□□ -1.91
LDLRP01130 RNU7-51P-201ENST00000516560 62 ntBASIC3.12□□□□□ -1.91
LDLRP01130 RNU6-445P-201ENST00000516949 107 ntBASIC3.12□□□□□ -1.91
LDLRP01130 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.12□□□□□ -1.91
LDLRP01130 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.12□□□□□ -1.91
LDLRP01130 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.12□□□□□ -1.91
LDLRP01130 AC010653.1-201ENST00000571108 881 ntBASIC3.12□□□□□ -1.91
LDLRP01130 RPL23AP84-201ENST00000571193 464 ntBASIC3.12□□□□□ -1.91
LDLRP01130 AC015917.1-201ENST00000579654 510 ntBASIC3.12□□□□□ -1.91
LDLRP01130 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.12□□□□□ -1.91
LDLRP01130 AC064836.2-201ENST00000609491 462 ntBASIC3.12□□□□□ -1.91
LDLRP01130 AL591516.1-201ENST00000611326 274 ntBASIC3.12□□□□□ -1.91
LDLRP01130 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.12□□□□□ -1.91
LDLRP01130 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.12□□□□□ -1.91
LDLRP01130 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LDLRP01130 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LDLRP01130 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LDLRP01130 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LDLRP01130 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LDLRP01130 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LDLRP01130 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LDLRP01130 AL356274.2-201ENST00000624379 3752 ntBASIC3.11□□□□□ -1.91
LDLRP01130 RNU5E-6P-201ENST00000365574 115 ntBASIC3.11□□□□□ -1.91
LDLRP01130 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
LDLRP01130 NDUFS5P1-201ENST00000405668 289 ntBASIC3.11□□□□□ -1.91
LDLRP01130 ZNF90P2-204ENST00000419323 1075 ntBASIC3.11□□□□□ -1.91
LDLRP01130 RAC1P6-201ENST00000423911 575 ntBASIC3.11□□□□□ -1.91
LDLRP01130 OR2AS1P-201ENST00000427827 319 ntBASIC3.11□□□□□ -1.91
LDLRP01130 AC133104.1-201ENST00000429100 218 ntBASIC3.11□□□□□ -1.91
LDLRP01130 RPL23AP30-201ENST00000432419 501 ntBASIC3.11□□□□□ -1.91
LDLRP01130 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.11□□□□□ -1.91
LDLRP01130 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.11□□□□□ -1.91
LDLRP01130 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.11□□□□□ -1.91
LDLRP01130 RN7SL75P-201ENST00000461926 281 ntBASIC3.11□□□□□ -1.91
LDLRP01130 AC007182.2-201ENST00000489251 402 ntBASIC3.11□□□□□ -1.91
LDLRP01130 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.11□□□□□ -1.91
LDLRP01130 LRRC34P2-201ENST00000514850 553 ntBASIC3.11□□□□□ -1.91
LDLRP01130 SCARNA24.1-201ENST00000516465 137 ntBASIC3.11□□□□□ -1.91
LDLRP01130 Y_RNA.701-201ENST00000516812 110 ntBASIC3.11□□□□□ -1.91
LDLRP01130 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.11□□□□□ -1.91
LDLRP01130 AC022690.1-201ENST00000526681 550 ntBASIC3.11□□□□□ -1.91
LDLRP01130 AP003034.1-201ENST00000534621 422 ntBASIC3.11□□□□□ -1.91
LDLRP01130 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LDLRP01130 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.11□□□□□ -1.91
LDLRP01130 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.11□□□□□ -1.91
LDLRP01130 HIF1AP1-201ENST00000553642 175 ntBASIC3.11□□□□□ -1.91
LDLRP01130 AC034105.3-201ENST00000565294 442 ntBASIC3.11□□□□□ -1.91
LDLRP01130 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.11□□□□□ -1.91
LDLRP01130 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.11□□□□□ -1.91
LDLRP01130 GLUD1P4-201ENST00000590914 418 ntBASIC3.11□□□□□ -1.91
LDLRP01130 AC078795.3-201ENST00000602913 472 ntBASIC3.11□□□□□ -1.91
LDLRP01130 Z84480.1-201ENST00000605131 311 ntBASIC3.11□□□□□ -1.91
LDLRP01130 RMST_3.1-201ENST00000611651 109 ntBASIC3.11□□□□□ -1.91
LDLRP01130 AL589994.2-201ENST00000621124 579 ntBASIC3.11□□□□□ -1.91
LDLRP01130 AC006111.3-201ENST00000622137 383 ntBASIC3.11□□□□□ -1.91
LDLRP01130 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.11□□□□□ -1.91
LDLRP01130 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.11□□□□□ -1.91
LDLRP01130 AC093908.1-201ENST00000623125 8092 ntBASIC3.11□□□□□ -1.91
LDLRP01130 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LDLRP01130 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.11□□□□□ -1.91
LDLRP01130 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.1□□□□□ -1.91
LDLRP01130 SDAD1P2-201ENST00000441308 2028 ntBASIC3.1□□□□□ -1.91
LDLRP01130 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.1□□□□□ -1.91
LDLRP01130 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LDLRP01130 RNU6-7-201ENST00000364784 107 ntBASIC3.1□□□□□ -1.91
LDLRP01130 RNU6-8-201ENST00000365467 107 ntBASIC3.1□□□□□ -1.91
LDLRP01130 Y_RNA.356-201ENST00000365475 113 ntBASIC3.1□□□□□ -1.91
LDLRP01130 RNU6-456P-201ENST00000384493 107 ntBASIC3.1□□□□□ -1.91
LDLRP01130 RNU6-332P-201ENST00000391193 108 ntBASIC3.1□□□□□ -1.91
LDLRP01130 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.1□□□□□ -1.91
LDLRP01130 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
LDLRP01130 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.1□□□□□ -1.91
LDLRP01130 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.1□□□□□ -1.91
LDLRP01130 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.1□□□□□ -1.91
LDLRP01130 GTF2IP20-201ENST00000431663 360 ntBASIC3.1□□□□□ -1.91
LDLRP01130 Z75741.1-201ENST00000446793 314 ntBASIC3.1□□□□□ -1.91
LDLRP01130 RPL23AP20-201ENST00000447965 421 ntBASIC3.1□□□□□ -1.91
LDLRP01130 SNORD97-201ENST00000459187 142 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms