Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 HMGB1P49-201ENST00000418882 569 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.96□□□□□ -2.1
SEMA3DO95025 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.96□□□□□ -2.1
SEMA3DO95025 AC096638.1-201ENST00000444678 216 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.96□□□□□ -2.1
SEMA3DO95025 OR6C5P-201ENST00000452388 923 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.96□□□□□ -2.1
SEMA3DO95025 AC139453.3-201ENST00000493276 369 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 RPF2P2-201ENST00000504693 896 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 SNORA31.6-201ENST00000516241 130 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 DEFB108A-201ENST00000530110 222 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.96□□□□□ -2.1
SEMA3DO95025 BNIP3P40-201ENST00000596017 556 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 AC005261.5-201ENST00000596280 355 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 AC013244.3-201ENST00000605614 388 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 AL391813.2-201ENST00000609113 322 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 AC016597.2-201ENST00000613256 341 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 AL356266.1-201ENST00000623311 483 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 AC064859.1-201ENST00000624741 174 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 AC091965.5-201ENST00000624785 342 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 MIR219B-201ENST00000637023 88 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 AC004520.1-201ENST00000608362 1413 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 AC110491.1-201ENST00000562191 2010 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 AC009487.4-201ENST00000624969 3585 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.95□□□□□ -2.1
SEMA3DO95025 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
SEMA3DO95025 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.95□□□□□ -2.1
SEMA3DO95025 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.95□□□□□ -2.1
SEMA3DO95025 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SEMA3DO95025 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SEMA3DO95025 RNU6-278P-201ENST00000390945 109 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.95□□□□□ -2.1
SEMA3DO95025 RN7SKP223-201ENST00000410582 62 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 AL030996.1-201ENST00000411430 235 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.95□□□□□ -2.1
SEMA3DO95025 NDUFS5P4-201ENST00000412983 318 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 CYCSP48-201ENST00000417124 323 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.95□□□□□ -2.1
SEMA3DO95025 AL139413.1-201ENST00000421309 217 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.95□□□□□ -2.1
SEMA3DO95025 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.95□□□□□ -2.1
SEMA3DO95025 AL035407.1-201ENST00000429211 571 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 GPM6BP2-201ENST00000432046 144 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SEMA3DO95025 AC016691.1-201ENST00000441321 413 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 GPM6BP1-201ENST00000446387 144 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.95□□□□□ -2.1
SEMA3DO95025 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.95□□□□□ -2.1
SEMA3DO95025 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.95□□□□□ -2.1
SEMA3DO95025 MRPS17P9-201ENST00000511924 393 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 AC008549.1-201ENST00000512900 643 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.95□□□□□ -2.1
SEMA3DO95025 IGKV3-31-201ENST00000523109 329 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.95□□□□□ -2.1
SEMA3DO95025 AC068587.4-201ENST00000533893 186 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.95□□□□□ -2.1
SEMA3DO95025 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.95□□□□□ -2.1
SEMA3DO95025 AC024619.4-201ENST00000580924 316 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 AL031281.1-201ENST00000604049 488 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 AC103710.1-201ENST00000610003 901 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.95□□□□□ -2.1
SEMA3DO95025 AL589743.7-201ENST00000612637 233 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 AC021755.4-201ENST00000616620 456 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 AC079416.3-201ENST00000624479 549 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.95□□□□□ -2.1
SEMA3DO95025 ZNF355P-201ENST00000427301 3216 ntBASIC1.95□□□□□ -2.1
SEMA3DO95025 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SEMA3DO95025 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.95□□□□□ -2.1
SEMA3DO95025 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SEMA3DO95025 RNU5A-8P-201ENST00000364102 114 ntBASIC1.94□□□□□ -2.1
SEMA3DO95025 RNU6-701P-201ENST00000384059 107 ntBASIC1.94□□□□□ -2.1
SEMA3DO95025 RSL24D1P4-201ENST00000400938 484 ntBASIC1.94□□□□□ -2.1
SEMA3DO95025 NDUFS5P1-201ENST00000405668 289 ntBASIC1.94□□□□□ -2.1
SEMA3DO95025 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.94□□□□□ -2.1
SEMA3DO95025 RNU6-584P-201ENST00000410350 95 ntBASIC1.94□□□□□ -2.1
SEMA3DO95025 RN7SKP192-201ENST00000411291 327 ntBASIC1.94□□□□□ -2.1
SEMA3DO95025 Z98742.3-201ENST00000418637 326 ntBASIC1.94□□□□□ -2.1
SEMA3DO95025 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.94□□□□□ -2.1
SEMA3DO95025 AC104651.1-201ENST00000427559 735 ntBASIC1.94□□□□□ -2.1
SEMA3DO95025 RPL36AP53-201ENST00000432891 316 ntBASIC1.94□□□□□ -2.1
SEMA3DO95025 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.94□□□□□ -2.1
SEMA3DO95025 AC004383.1-201ENST00000438135 289 ntBASIC1.94□□□□□ -2.1
SEMA3DO95025 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.94□□□□□ -2.1
SEMA3DO95025 AC098831.1-201ENST00000440661 216 ntBASIC1.94□□□□□ -2.1
SEMA3DO95025 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.94□□□□□ -2.1
SEMA3DO95025 FABP5P15-201ENST00000453566 214 ntBASIC1.94□□□□□ -2.1
SEMA3DO95025 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.94□□□□□ -2.1
SEMA3DO95025 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.94□□□□□ -2.1
SEMA3DO95025 AC055731.1-201ENST00000474387 401 ntBASIC1.94□□□□□ -2.1
SEMA3DO95025 RPL9P6-201ENST00000492764 598 ntBASIC1.94□□□□□ -2.1
SEMA3DO95025 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.94□□□□□ -2.1
SEMA3DO95025 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.94□□□□□ -2.1
SEMA3DO95025 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.94□□□□□ -2.1
SEMA3DO95025 RNU5A-4P-201ENST00000516588 111 ntBASIC1.94□□□□□ -2.1
SEMA3DO95025 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.94□□□□□ -2.1
SEMA3DO95025 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.94□□□□□ -2.1
SEMA3DO95025 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.94□□□□□ -2.1
SEMA3DO95025 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms