Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.54□□□□□ -1.68
VAMP4O75379 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.54□□□□□ -1.68
VAMP4O75379 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.54□□□□□ -1.68
VAMP4O75379 AC087854.1-201ENST00000519706 414 ntBASIC4.54□□□□□ -1.68
VAMP4O75379 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.54□□□□□ -1.68
VAMP4O75379 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.54□□□□□ -1.68
VAMP4O75379 MIR4738-201ENST00000579134 87 ntBASIC4.54□□□□□ -1.68
VAMP4O75379 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.54□□□□□ -1.68
VAMP4O75379 AC100830.2-201ENST00000581636 240 ntBASIC4.54□□□□□ -1.68
VAMP4O75379 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.54□□□□□ -1.68
VAMP4O75379 AL669831.3-213ENST00000636676 183 ntBASIC4.54□□□□□ -1.68
VAMP4O75379 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VAMP4O75379 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
VAMP4O75379 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VAMP4O75379 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.54□□□□□ -1.68
VAMP4O75379 AC066616.2-201ENST00000559334 1481 ntBASIC4.54□□□□□ -1.68
VAMP4O75379 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
VAMP4O75379 AC068647.1-201ENST00000489539 2265 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
VAMP4O75379 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.53□□□□□ -1.68
VAMP4O75379 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.53□□□□□ -1.68
VAMP4O75379 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
VAMP4O75379 Y_RNA.5-201ENST00000362334 102 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 RNA5SP119-201ENST00000362715 117 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 RNU6-1040P-201ENST00000383974 107 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 RNU6-308P-201ENST00000390957 107 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.53□□□□□ -1.68
VAMP4O75379 AL139039.1-201ENST00000401900 692 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.53□□□□□ -1.68
VAMP4O75379 HMGN2P31-201ENST00000432430 273 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.53□□□□□ -1.68
VAMP4O75379 AL035666.1-201ENST00000446195 348 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 RN7SL594P-201ENST00000470590 287 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 AC026801.1-201ENST00000497178 464 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 AC021146.2-201ENST00000504736 556 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 NDUFB4P9-201ENST00000511646 388 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.53□□□□□ -1.68
VAMP4O75379 Y_RNA.720-201ENST00000517166 92 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.53□□□□□ -1.68
VAMP4O75379 IGKV2D-19-201ENST00000523346 262 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VAMP4O75379 AC007458.1-201ENST00000542812 373 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.53□□□□□ -1.68
VAMP4O75379 DNAJC8P1-201ENST00000554535 372 ntBASIC4.53□□□□□ -1.68
VAMP4O75379 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.53□□□□□ -1.68
VAMP4O75379 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
VAMP4O75379 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.53□□□□□ -1.68
VAMP4O75379 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.53□□□□□ -1.68
VAMP4O75379 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VAMP4O75379 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VAMP4O75379 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
VAMP4O75379 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VAMP4O75379 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VAMP4O75379 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.52□□□□□ -1.69
VAMP4O75379 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.52□□□□□ -1.69
VAMP4O75379 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VAMP4O75379 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VAMP4O75379 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VAMP4O75379 RNU6-1115P-201ENST00000362490 106 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 RNA5SP189-201ENST00000364920 115 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 SNORA75B-201ENST00000384053 137 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 Y_RNA.480-201ENST00000384364 102 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.52□□□□□ -1.69
VAMP4O75379 RPS12P24-201ENST00000412619 387 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 AC093578.1-201ENST00000415219 368 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 RPL7P37-201ENST00000425095 738 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 MTATP6P4-201ENST00000427725 675 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.52□□□□□ -1.69
VAMP4O75379 AL591212.2-201ENST00000433923 257 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 HIGD1AP11-201ENST00000438361 280 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.52□□□□□ -1.69
VAMP4O75379 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.52□□□□□ -1.69
VAMP4O75379 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
VAMP4O75379 AC110768.1-201ENST00000509222 400 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 RNU6-1046P-201ENST00000516538 107 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 RNU6-1332P-201ENST00000516666 104 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 RN7SKP295-201ENST00000517264 153 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 RNU6-840P-201ENST00000517275 65 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 AC009902.1-201ENST00000519351 183 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 RNU6-323P-201ENST00000521915 107 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.52□□□□□ -1.69
VAMP4O75379 AC007938.3-201ENST00000604965 623 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 MIR6128-201ENST00000615528 109 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 AP003355.3-201ENST00000623465 114 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.52□□□□□ -1.69
VAMP4O75379 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
VAMP4O75379 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VAMP4O75379 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
VAMP4O75379 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VAMP4O75379 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.52□□□□□ -1.69
VAMP4O75379 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
VAMP4O75379 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.51□□□□□ -1.69
VAMP4O75379 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
VAMP4O75379 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.51□□□□□ -1.69
VAMP4O75379 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VAMP4O75379 AC009812.4-201ENST00000569134 1805 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VAMP4O75379 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VAMP4O75379 MAPK10-373ENST00000641983 6772 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms