Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SNORD115-38-201ENST00000365037 82 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 SNORA70C-201ENST00000384538 135 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 RNA5SP372-201ENST00000390836 115 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 U3.19-201ENST00000390893 196 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 RPL21P3-201ENST00000395517 478 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 RPS21P8-201ENST00000413365 247 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.08□□□□□ -1.6
GFRA3O60609 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.08□□□□□ -1.6
GFRA3O60609 snoU109.4-201ENST00000458953 143 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.08□□□□□ -1.6
GFRA3O60609 AC091826.1-201ENST00000514065 313 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.08□□□□□ -1.6
GFRA3O60609 MIR4666B-201ENST00000578142 81 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 MIR3944-201ENST00000581277 108 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.08□□□□□ -1.6
GFRA3O60609 MIR6075-201ENST00000620782 95 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 AC114774.1-201ENST00000507410 1770 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA3O60609 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
GFRA3O60609 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
GFRA3O60609 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
GFRA3O60609 AL731532.1-201ENST00000623972 4236 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GFRA3O60609 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GFRA3O60609 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
GFRA3O60609 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GFRA3O60609 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GFRA3O60609 Y_RNA.49-201ENST00000362714 112 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 SNORD45.3-201ENST00000363836 72 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 RNU1-146P-201ENST00000364015 165 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 SNORD46.1-201ENST00000364139 104 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 RNU6-978P-201ENST00000364371 103 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 SNORD18B-201ENST00000365659 72 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 RNU6-1310P-201ENST00000384153 107 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 Y_RNA.528-201ENST00000384575 108 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
GFRA3O60609 AL590762.2-201ENST00000395798 571 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 RPL23AP17-201ENST00000401064 499 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 MIR1263-201ENST00000408324 86 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 AC090804.1-201ENST00000448870 490 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 SNRPGP8-201ENST00000454064 226 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.07□□□□□ -1.6
GFRA3O60609 ENPP7P9-201ENST00000514456 627 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 AP001781.1-201ENST00000530977 207 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 U4atac.1-201ENST00000618345 95 ntBASIC5.07□□□□□ -1.6
GFRA3O60609 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GFRA3O60609 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.07□□□□□ -1.6
GFRA3O60609 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
GFRA3O60609 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.07□□□□□ -1.6
GFRA3O60609 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
GFRA3O60609 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GFRA3O60609 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GFRA3O60609 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GFRA3O60609 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
GFRA3O60609 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA3O60609 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA3O60609 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA3O60609 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA3O60609 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
GFRA3O60609 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA3O60609 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA3O60609 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA3O60609 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 RNU5A-1-201ENST00000362698 116 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 SNORA70F-201ENST00000384142 135 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 MIR570-201ENST00000384917 97 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 MIR10A-201ENST00000385043 110 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 AC074117.2-201ENST00000417130 397 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 BX510359.2-201ENST00000417920 305 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 CYCSP10-201ENST00000417973 294 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 EIF1AXP1-201ENST00000419267 435 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.06□□□□□ -1.6
GFRA3O60609 RPS29P10-201ENST00000439197 166 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 RN7SL189P-201ENST00000468631 289 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 AC011276.1-201ENST00000469688 323 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 RNA5SP43-201ENST00000516559 110 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 RNA5SP471-201ENST00000516971 106 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 RNU2-12P-201ENST00000517216 168 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 CYCSP23-201ENST00000519781 313 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 MIR4420-201ENST00000583944 77 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.06□□□□□ -1.6
GFRA3O60609 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.06□□□□□ -1.6
GFRA3O60609 IGLL4P-201ENST00000614590 133 ntBASIC5.06□□□□□ -1.6
GFRA3O60609 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.06□□□□□ -1.6
GFRA3O60609 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.06□□□□□ -1.6
GFRA3O60609 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA3O60609 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA3O60609 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA3O60609 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
GFRA3O60609 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA3O60609 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
GFRA3O60609 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA3O60609 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA3O60609 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA3O60609 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA3O60609 ASNSP1-201ENST00000518311 1939 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA3O60609 SAGE2P-201ENST00000420011 2126 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.05□□□□□ -1.6
GFRA3O60609 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms