Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 MTCYBP23-201ENST00000558717 1102 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC1.4□□□□□ -2.19
SSNA1O43805 MIR5195-201ENST00000583555 115 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.4□□□□□ -2.19
SSNA1O43805 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.4□□□□□ -2.19
SSNA1O43805 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.4□□□□□ -2.19
SSNA1O43805 AC021646.1-201ENST00000605469 484 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 AC099785.1-201ENST00000605697 437 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 AC107952.2-201ENST00000606048 486 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.4□□□□□ -2.19
SSNA1O43805 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.4□□□□□ -2.19
SSNA1O43805 MIR219B-201ENST00000637023 88 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SSNA1O43805 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.39□□□□□ -2.19
SSNA1O43805 RNA5SP465-201ENST00000391195 109 ntBASIC1.39□□□□□ -2.19
SSNA1O43805 AC068050.1-201ENST00000394891 380 ntBASIC1.39□□□□□ -2.19
SSNA1O43805 MIR934-201ENST00000401241 83 ntBASIC1.39□□□□□ -2.19
SSNA1O43805 MTCO1P56-201ENST00000401674 224 ntBASIC1.39□□□□□ -2.19
SSNA1O43805 RPL23AP39-201ENST00000415533 405 ntBASIC1.39□□□□□ -2.19
SSNA1O43805 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.39□□□□□ -2.19
SSNA1O43805 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.39□□□□□ -2.19
SSNA1O43805 FCF1P6-201ENST00000456841 595 ntBASIC1.39□□□□□ -2.19
SSNA1O43805 AC126389.1-201ENST00000477436 290 ntBASIC1.39□□□□□ -2.19
SSNA1O43805 AC027575.1-201ENST00000481064 460 ntBASIC1.39□□□□□ -2.19
SSNA1O43805 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.39□□□□□ -2.19
SSNA1O43805 CAB39P1-201ENST00000502277 460 ntBASIC1.39□□□□□ -2.19
SSNA1O43805 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.39□□□□□ -2.19
SSNA1O43805 ANXA2P1-201ENST00000505539 926 ntBASIC1.39□□□□□ -2.19
SSNA1O43805 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.39□□□□□ -2.19
SSNA1O43805 AC093752.1-206ENST00000511823 336 ntBASIC1.39□□□□□ -2.19
SSNA1O43805 AC024589.1-201ENST00000512207 263 ntBASIC1.39□□□□□ -2.19
SSNA1O43805 SNORA31.3-201ENST00000516029 96 ntBASIC1.39□□□□□ -2.19
SSNA1O43805 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.39□□□□□ -2.19
SSNA1O43805 MIR4782-201ENST00000577987 79 ntBASIC1.39□□□□□ -2.19
SSNA1O43805 uc_338.5-201ENST00000611839 155 ntBASIC1.39□□□□□ -2.19
SSNA1O43805 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SSNA1O43805 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SSNA1O43805 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SSNA1O43805 RNU5E-1-201ENST00000362477 120 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 MIR597-201ENST00000384968 97 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 MIR670-201ENST00000390142 98 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 RNU4-53P-201ENST00000410828 140 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.38□□□□□ -2.19
SSNA1O43805 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.38□□□□□ -2.19
SSNA1O43805 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.38□□□□□ -2.19
SSNA1O43805 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.38□□□□□ -2.19
SSNA1O43805 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.38□□□□□ -2.19
SSNA1O43805 BRK1P2-201ENST00000442875 223 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 NDUFAF4P2-201ENST00000445374 520 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 HMGN2P23-201ENST00000456759 269 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.38□□□□□ -2.19
SSNA1O43805 AC104629.1-201ENST00000494226 508 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.38□□□□□ -2.19
SSNA1O43805 AC097462.2-201ENST00000504623 481 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.38□□□□□ -2.19
SSNA1O43805 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.38□□□□□ -2.19
SSNA1O43805 AC084851.1-201ENST00000529105 249 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.38□□□□□ -2.19
SSNA1O43805 AL512347.1-201ENST00000566420 503 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.38□□□□□ -2.19
SSNA1O43805 RPL30P11-203ENST00000598995 310 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 AL670379.10-201ENST00000604330 253 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 AL670379.9-201ENST00000605428 253 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 AC026790.2-201ENST00000606282 430 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.38□□□□□ -2.19
SSNA1O43805 MIR6075-201ENST00000620782 95 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 MIR6810-201ENST00000622701 70 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 AC104985.3-201ENST00000623479 597 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 AC112204.3-201ENST00000623822 332 ntBASIC1.38□□□□□ -2.19
SSNA1O43805 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.38□□□□□ -2.19
SSNA1O43805 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.38□□□□□ -2.19
SSNA1O43805 RNU6-338P-201ENST00000383888 105 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 MIR29C-201ENST00000385231 88 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 CISD1P1-201ENST00000393907 327 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 MIR1262-201ENST00000408276 93 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 RNU2-2P-201ENST00000410396 191 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 RNU2-48P-201ENST00000410694 191 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 AC009310.1-201ENST00000414414 451 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 TIMM9P2-201ENST00000419324 266 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 AC008267.5-201ENST00000424928 265 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 AL451062.2-201ENST00000427515 271 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.37□□□□□ -2.19
SSNA1O43805 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.37□□□□□ -2.19
SSNA1O43805 RNU5B-3P-201ENST00000516601 115 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 RNU6-586P-201ENST00000517265 104 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.37□□□□□ -2.19
SSNA1O43805 AP005660.1-201ENST00000522972 293 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 AL132657.2-201ENST00000564417 358 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 AC093249.1-201ENST00000567049 203 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 MIR3198-2-201ENST00000577868 80 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 AC126365.2-201ENST00000580630 379 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.37□□□□□ -2.19
SSNA1O43805 RNU6-91P-201ENST00000607774 107 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 U2.15-201ENST00000611544 191 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 U2.16-201ENST00000613119 191 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 U2.12-201ENST00000613778 191 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 U2.20-201ENST00000613956 192 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 U2.9-201ENST00000615427 191 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 U2.11-201ENST00000616345 191 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 U2.2-201ENST00000616535 191 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms