Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.45□□□□□ -1.7
SRGAP3O43295 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.45□□□□□ -1.7
SRGAP3O43295 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.45□□□□□ -1.7
SRGAP3O43295 HMGB3P30-201ENST00000457863 606 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 AC087884.1-201ENST00000469738 328 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SRGAP3O43295 AC026801.1-201ENST00000497178 464 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 AC022493.2-201ENST00000506122 481 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.45□□□□□ -1.7
SRGAP3O43295 SCARNA16.2-201ENST00000516520 172 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 Y_RNA.689-201ENST00000516589 107 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 RNU6-264P-201ENST00000517134 104 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 SNORD116.3-201ENST00000517176 78 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SRGAP3O43295 IGKV2D-19-201ENST00000523346 262 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.45□□□□□ -1.7
SRGAP3O43295 MIR4444-1-201ENST00000581696 74 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 MIR4444-2-201ENST00000584390 74 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SRGAP3O43295 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.45□□□□□ -1.7
SRGAP3O43295 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.45□□□□□ -1.7
SRGAP3O43295 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRGAP3O43295 AC005592.1-201ENST00000566527 1640 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRGAP3O43295 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRGAP3O43295 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SRGAP3O43295 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SRGAP3O43295 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.44□□□□□ -1.7
SRGAP3O43295 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.44□□□□□ -1.7
SRGAP3O43295 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SRGAP3O43295 Y_RNA.2-201ENST00000362330 96 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 RNU6-263P-201ENST00000363811 107 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SRGAP3O43295 AC019155.1-201ENST00000382242 574 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 RNU6-95P-201ENST00000384697 107 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 AC092809.3-201ENST00000415453 231 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 USMG5P1-201ENST00000425964 177 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 AC008065.1-201ENST00000428525 348 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 HMGN2P31-201ENST00000432430 273 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 HMGB1P12-201ENST00000438594 598 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 HMGB1P25-201ENST00000468402 607 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.44□□□□□ -1.7
SRGAP3O43295 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.44□□□□□ -1.7
SRGAP3O43295 RNU6-579P-201ENST00000516879 102 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SRGAP3O43295 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.44□□□□□ -1.7
SRGAP3O43295 AC025423.5-201ENST00000550230 219 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 AC026371.1-201ENST00000551867 419 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 PRR13P7-201ENST00000605538 430 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 AC100812.1-201ENST00000607622 580 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 AC007998.5-201ENST00000622938 237 ntBASIC4.44□□□□□ -1.7
SRGAP3O43295 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SRGAP3O43295 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.44□□□□□ -1.7
SRGAP3O43295 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SRGAP3O43295 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SRGAP3O43295 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SRGAP3O43295 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.43□□□□□ -1.7
SRGAP3O43295 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 RNU6-450P-201ENST00000364654 107 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 RNU6-283P-201ENST00000364788 107 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 RNU6-146P-201ENST00000384602 108 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 RNU6-847P-201ENST00000411115 108 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 RHEBP3-201ENST00000411920 351 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 Z99755.1-201ENST00000414048 380 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 RPS29P4-201ENST00000414733 161 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 AC080125.1-201ENST00000414888 684 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 AC099677.1-201ENST00000420575 175 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.43□□□□□ -1.7
SRGAP3O43295 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.43□□□□□ -1.7
SRGAP3O43295 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.43□□□□□ -1.7
SRGAP3O43295 AL669831.1-202ENST00000428504 417 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 NEFMP1-201ENST00000443423 1006 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.43□□□□□ -1.7
SRGAP3O43295 AC084357.1-201ENST00000473404 255 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.43□□□□□ -1.7
SRGAP3O43295 AC009812.2-201ENST00000517657 457 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 AC087854.1-201ENST00000519706 414 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SRGAP3O43295 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.43□□□□□ -1.7
SRGAP3O43295 AL669831.4-202ENST00000590817 238 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 AC092447.9-201ENST00000603395 144 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 AC104695.3-201ENST00000604052 296 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 AC110741.2-201ENST00000605278 268 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 AC018889.1-201ENST00000605372 397 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 AC007619.2-201ENST00000605743 379 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 AL359547.2-201ENST00000615810 418 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 U4.6-201ENST00000621618 127 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SRGAP3O43295 AL137003.2-201ENST00000606924 2538 ntBASIC4.43□□□□□ -1.7
SRGAP3O43295 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
SRGAP3O43295 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SRGAP3O43295 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SRGAP3O43295 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.42□□□□□ -1.7
SRGAP3O43295 SNORD62.1-201ENST00000362541 86 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 MIR670-201ENST00000390142 98 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 Y_RNA.645-201ENST00000391229 102 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 SNORA68.2-201ENST00000391263 128 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 RN7SKP53-201ENST00000411337 315 ntBASIC4.42□□□□□ -1.7
SRGAP3O43295 AL137014.1-201ENST00000420490 1226 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms